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Rhox3f Gene Detail
Summary
  • Symbol
    Rhox3f
  • Name
    reproductive homeobox 3F
  • Synonyms
    OTTMUSG00000017155
  • Feature Type
    protein coding gene
  • IDs
    MGI:3770277
    NCBI Gene: 621852
  • Member of
    Rhox cluster
  • Alliance
Location &
Maps
more
  • Sequence Map
    ChrX:37581352-37585496 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 21.88 cM
Strain
Comparison
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  • Strain Annotations
    7
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3770277
protein coding gene ChrX:37580992-37585496 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0035633
protein coding gene ChrX:32724525-32729644 (-)
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0035298
protein coding gene ChrX:34159844-34170018 (-)
DBA/2J MGP_DBA2J_G0035450
protein coding gene ChrX:32512640-32518144 (-)
FVB/NJ MGP_FVBNJ_G0035402
protein coding gene ChrX:32297613-32302422 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0035438
protein coding gene ChrX:34546128-34588499 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0034161
protein coding gene ChrX:21364862-21367741 (+)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype reference
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 621852 NCBI Gene Model | MGI Sequence Detail 4145 C57BL/6J ±  kb
transcript NM_001040089 RefSeq | MGI Sequence Detail 833 C57BL/6  
polypeptide NP_001035178 RefSeq | MGI Sequence Detail 215 C57BL/6  
For the selected sequence
Protein
Information
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  • UniProt
    5 Sequences
  • InterPro Domains
    IPR001356 Homeobox domain
    IPR009057 Homeobox-like domain superfamily
Molecular
Reagents
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  • All nucleic 1
    cDNA 1

    Microarray probesets 1
Other
Accession IDs
less
MGI:3712647
References
more
  • Summaries
    All 13
    Phenotypes 1
  • Earliest
    J:106768 Maclean JA 2nd, et al., Rhox homeobox gene cluster: recent duplication of three family members. Genesis. 2006 Mar;44(3):122-9
  • Latest
    J:229199 Song HW, et al., shRNA off-target effects in vivo: impaired endogenous siRNA expression and spermatogenic defects. PLoS One. 2015;10(3):e0118549

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/03/2020
MGI 6.15
The Jackson Laboratory