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Rhox11-ps1 Pseudogene Detail
Summary
  • Symbol
    Rhox11-ps1
  • Name
    reproductive homeobox 11, pseudogene 1
  • Synonyms
    Gm15474
Location &
Maps
more
  • Sequence Map
    ChrX:37021351-37022360 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 22.18 cM
Strain
Comparison
more
  • SNPs within 2kb
    10 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3705872
 pseudogene ChrX:37021351-37022360 (-)
129S1/SvImJ MGP_129S1SvImJ_G0040677
 pseudogene ChrX:32856584-32857593 (-)
A/J MGP_AJ_G0040676
 pseudogene ChrX:32935226-32936235 (-)
AKR/J MGP_AKRJ_G0040599
 pseudogene ChrX:33658585-33659594 (-)
BALB/cJ MGP_BALBcJ_G0040665
 pseudogene ChrX:32620634-32621643 (-)
C3H/HeJ MGP_C3HHeJ_G0040302
 pseudogene ChrX:33200814-33201823 (-)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0037496
 pseudogene ChrX:31308949-31309932 (-)
CAST/EiJ MGP_CASTEiJ_G0039340
 pseudogene ChrX:21215227-21216236 (-)
CBA/J MGP_CBAJ_G0040266
 pseudogene ChrX:34430915-34431924 (-)
DBA/2J MGP_DBA2J_G0040482
 pseudogene ChrX:32760208-32761217 (-)
FVB/NJ MGP_FVBNJ_G0040399
 pseudogene ChrX:32494928-32495937 (-)
LP/J MGP_LPJ_G0040520
 pseudogene ChrX:33241651-33242660 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0040404
 pseudogene ChrX:34721949-34722958 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0041411
 pseudogene ChrX:32888553-32889562 (-)
PWK/PhJ MGP_PWKPhJ_G0038995
 pseudogene ChrX:20809933-20810942 (-)
SPRET/EiJ MGP_SPRETEiJ_G0038710
 pseudogene ChrX:21708068-21709076 (-)
WSB/EiJ MGP_WSBEiJ_G0039590
 pseudogene ChrX:32587877-32588886 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 104053955 NCBI Gene Model | MGI Sequence Detail 1010 C57BL/6J ±  kb
For the selected sequence
References
more
  • Summaries
    All 7
    Phenotypes 2
  • Earliest
    J:229199 Song HW, et al., shRNA off-target effects in vivo: impaired endogenous siRNA expression and spermatogenic defects. PLoS One. 2015;10(3):e0118549
  • Latest
    J:240574 Song HW, et al., The Homeobox Transcription Factor RHOX10 Drives Mouse Spermatogonial Stem Cell Establishment. Cell Rep. 2016 Sep 27;17(1):149-64
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory