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Gm12336 Gene Detail
Summary
  • Symbol
    Gm12336
  • Name
    predicted gene 12336
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3650722
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr11:75313557-75314166 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 45.88 cM
Strain
Comparison
more
  • SNPs within 2kb
    4 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650722
 lncRNA gene Chr11:75313557-75314166 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005258
 lincRNA gene Chr11:76167082-76167693 (-)
A/J MGP_AJ_G0005243
 lincRNA gene Chr11:73336456-73337063 (-)
AKR/J MGP_AKRJ_G0005221
 lincRNA gene Chr11:75550154-75550765 (-)
BALB/cJ MGP_BALBcJ_G0005223
 lincRNA gene Chr11:73706407-73707018 (-)
C3H/HeJ MGP_C3HHeJ_G0005172
 lincRNA gene Chr11:75567899-75568510 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005375
 lincRNA gene Chr11:78545406-78546015 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004769
 lincRNA gene Chr11:70344072-70344713 (-)
CAST/EiJ MGP_CASTEiJ_G0005119
 lincRNA gene Chr11:75962750-75963370 (-)
CBA/J MGP_CBAJ_G0005162
 lincRNA gene Chr11:81985955-81986566 (-)
DBA/2J MGP_DBA2J_G0005179
 lincRNA gene Chr11:72941124-72941735 (-)
FVB/NJ MGP_FVBNJ_G0005204
 lincRNA gene Chr11:72500850-72501459 (-)
LP/J MGP_LPJ_G0005260
 lincRNA gene Chr11:76752196-76752807 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005187
 lincRNA gene Chr11:82567934-82568545 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005378
 lincRNA gene Chr11:75760856-75761465 (-)
PWK/PhJ MGP_PWKPhJ_G0005068
 lincRNA gene Chr11:73634604-73635215 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004990
 lincRNA gene Chr11:75317990-75318609 (-)
WSB/EiJ MGP_WSBEiJ_G0005167
 lincRNA gene Chr11:75566640-75567256 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085359 Ensembl Gene Model | MGI Sequence Detail 610 C57BL/6J ±  kb
transcript ENSMUST00000125962 Ensembl | MGI Sequence Detail 322 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 12
    Phenotypes 8
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory