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Gm11542 Gene Detail
Summary
  • Symbol
    Gm11542
  • Name
    predicted gene 11542
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3650067
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:94568391-94578490 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 11, 58.90 cM
Strain
Comparison
more
  • SNPs within 2kb
    99 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650067
lncRNA gene Chr11:94568391-94578490 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015195
unclassified non-coding RNA gene Chr11:96789775-96802541 (+)
A/J MGP_AJ_G0015169
unclassified non-coding RNA gene Chr11:92907389-92917634 (+)
AKR/J MGP_AKRJ_G0015132
unclassified non-coding RNA gene Chr11:95797129-95807566 (+)
BALB/cJ MGP_BALBcJ_G0015131
unclassified non-coding RNA gene Chr11:93356444-93366478 (+)
C3H/HeJ MGP_C3HHeJ_G0014955
unclassified non-coding RNA gene Chr11:95880736-95890962 (+)
C57BL/6NJ MGP_C57BL6NJ_G0015588
unclassified non-coding RNA gene Chr11:99826633-99836662 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013331
unclassified non-coding RNA gene Chr11:90398764-90409254 (+)
CAST/EiJ MGP_CASTEiJ_G0014508
unclassified non-coding RNA gene Chr11:96608293-96620910 (+)
CBA/J MGP_CBAJ_G0014934
unclassified non-coding RNA gene Chr11:103950525-103966016 (+)
DBA/2J MGP_DBA2J_G0015027
unclassified non-coding RNA gene Chr11:92487667-92498132 (+)
FVB/NJ MGP_FVBNJ_G0015039
unclassified non-coding RNA gene Chr11:91905608-91915754 (+)
LP/J MGP_LPJ_G0015108
unclassified non-coding RNA gene Chr11:97330185-97340310 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015065
unclassified non-coding RNA gene Chr11:103952030-103963933 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0015627
unclassified non-coding RNA gene Chr11:96036729-96046783 (+)
PWK/PhJ MGP_PWKPhJ_G0014300
unclassified non-coding RNA gene Chr11:93421966-93432362 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014087
unclassified non-coding RNA gene Chr11:95705526-95715876 (+)
WSB/EiJ MGP_WSBEiJ_G0014611
unclassified non-coding RNA gene Chr11:95908769-95919163 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085051 Ensembl Gene Model | MGI Sequence Detail 10100 C57BL/6J ±  kb
transcript ENSMUST00000126480 Ensembl | MGI Sequence Detail 1511 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 10
    Phenotypes 6
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory