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Ifna15 Gene Detail
Summary
  • Symbol
    Ifna15
  • Name
    interferon alpha 15
  • Synonyms
    Gm12597, Ifnaa
  • Feature Type
    protein coding gene
  • IDs
    MGI:3649418
    NCBI Gene: 242517
  • Gene Overview
    MyGene.info: IFNA4
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr4:88557673-88558245 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 41.96 cM
Strain
Comparison
more
  • SNPs within 2kb
    10 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649418
protein coding gene Chr4:88557673-88558245 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028422
protein coding gene Chr4:88435642-88436214 (-)
A/J MGP_AJ_G0028383
protein coding gene Chr4:85345873-85348068 (-)
AKR/J MGP_AKRJ_G0028332
protein coding gene Chr4:87459521-87460093 (-)
BALB/cJ MGP_BALBcJ_G0028403
protein coding gene Chr4:85559464-85560036 (-)
C3H/HeJ MGP_C3HHeJ_G0028118
protein coding gene Chr4:88177955-88178527 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028842
protein coding gene Chr4:91805758-91806330 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026142
protein coding gene Chr4:81331932-81332874 (-)
CAST/EiJ MGP_CASTEiJ_G0027559
protein coding gene Chr4:86016202-86103792 (-)
CBA/J MGP_CBAJ_G0028087
protein coding gene Chr4:94637977-94638549 (-)
DBA/2J MGP_DBA2J_G0028236
protein coding gene Chr4:85105679-85106251 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0028336
protein coding gene Chr4:88787669-88788241 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028231
protein coding gene Chr4:99628737-99629309 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028879
protein coding gene Chr4:87593735-87594307 (-)
PWK/PhJ MGP_PWKPhJ_G0027282
protein coding gene Chr4:83426128-83513023 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027107
protein coding gene Chr4:85100274-85203741 (-)
WSB/EiJ MGP_WSBEiJ_G0027635
protein coding gene Chr4:87799301-87799829 (-)



Homology
more
  • Human Ortholog
    IFNA4, interferon alpha 4
  • Vertebrate Orthologs
    25
  • Human Ortholog
    IFNA4, interferon alpha 4
    Orthology source: HomoloGene
  • Synonyms
    IFN-alpha4a, INFA4
  • Links
    NCBI Gene ID: 3441
    neXtProt AC: NX_P05014
    UniProt: P05014

  • Chr Location
    9p21.3; chr9:21186618-21187599 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Genomic Mutations
    3 involving Ifna15
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 242517 NCBI Gene Model | MGI Sequence Detail 573 C57BL/6J ±  kb
transcript NM_206870 RefSeq | MGI Sequence Detail 573 Not Specified  
polypeptide NP_996753 RefSeq | MGI Sequence Detail 190 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR009079 Four-helical cytokine-like, core
    IPR000471 Interferon alpha/beta/delta
Molecular
Reagents
less
  • All nucleic 2
    Genomic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 18
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:17550 Daugherty B, et al., Isolation and bacterial expression of a murine alpha leukocyte interferon gene. J Interferon Res. 1984 Fall;4(4):635-43
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/15/2019
MGI 6.14
The Jackson Laboratory