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Apol11a Gene Detail
Summary
  • Symbol
    Apol11a
  • Name
    apolipoprotein L 11a
  • Synonyms
    EG626615
  • Feature Type
    protein coding gene
  • IDs
    MGI:3649094
    NCBI Gene: 626615
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:77508129-77517874 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 36.40 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    73 from dbSNP Build 142
  • Strain Annotations
    8
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649094
protein coding gene Chr15:77508129-77518051 (+)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0022432
protein coding gene Chr15:80602680-80631377 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019968
protein coding gene Chr15:71630976-71640168 (-)
CAST/EiJ MGP_CASTEiJ_G0021286
protein coding gene Chr15:77669929-77710556 (+)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0021856
protein coding gene Chr15:74463934-74525980 (-)
FVB/NJ MGP_FVBNJ_G0021838
protein coding gene Chr15:73408402-73414142 (+)
LP/J MGP_LPJ_G0021930
protein coding gene Chr15:77908319-77912349 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0021030
protein coding gene Chr15:74498957-74507995 (+)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    20 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    2
  • Genomic Mutations
    4 involving Apol11a
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 626615 NCBI Gene Model | MGI Sequence Detail 9746 C57BL/6J ±  kb
transcript NM_001177533 RefSeq | MGI Sequence Detail 1134 C57BL/6  
polypeptide NP_001171004 RefSeq | MGI Sequence Detail 334 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR008405 Apolipoprotein L
References
more
  • Summaries
    All 28
    Diseases 1
    Gene Ontology 1
    Phenotypes 20
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory