About   Help   FAQ
Gm5414 Gene Detail
Summary
  • Symbol
    Gm5414
  • Name
    predicted gene 5414
  • Feature Type
    protein coding gene
  • IDs
    MGI:3646939
    NCBI Gene: 406223
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:101624028-101628188 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 56.94 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    48 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646939
protein coding gene Chr15:101624028-101628252 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022381
protein coding gene Chr15:103724759-103734195 (-)
A/J MGP_AJ_G0022343
protein coding gene Chr15:99607933-99623589 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0022347
protein coding gene Chr15:99719116-99725162 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0022795
protein coding gene Chr15:107593657-107599508 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0021641
protein coding gene Chr15:103592851-103597197 (-)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0022283
protein coding gene Chr15:103886765-103893941 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022213
protein coding gene Chr15:114982404-114987980 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022809
protein coding gene Chr15:102696040-102700116 (-)
PWK/PhJ MGP_PWKPhJ_G0021380
protein coding gene Chr15:99120482-99125138 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021213
protein coding gene Chr15:102586297-102590713 (-)
WSB/EiJ MGP_WSBEiJ_G0021691
protein coding gene Chr15:103336351-103341147 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    25 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Radiation induced
    2
  • Targeted
    2
  • Genomic Mutations
    4 involving Gm5414
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Expression
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000064232 Ensembl Gene Model | MGI Sequence Detail 4161 C57BL/6J ±  kb
transcript ENSMUST00000062879 Ensembl | MGI Sequence Detail 1659 Not Applicable  
polypeptide ENSMUSP00000059101 Ensembl | MGI Sequence Detail 552 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR018039 Intermediate filament protein, conserved site
    IPR039008 Intermediate filament, rod domain
    IPR042180 Intermediate filament, rod domain, coil 1B
    IPR003054 Keratin, type II
    IPR032444 Keratin type II head
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 35
    Diseases 1
    Phenotypes 25
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/26/2019
MGI 6.14
The Jackson Laboratory