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Rnf7l Gene Detail
Summary
  • Symbol
    Rnf7l
  • Name
    ring finger protein 7 like
  • Synonyms
    Gm7075
Location &
Maps
more
  • Sequence Map
    Chr10:63257144-63257568 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 32.57 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    47 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646561
 protein coding gene Chr10:63256379-63257568 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017317
 protein coding gene Chr10:62953025-62953601 (-)
A/J MGP_AJ_G0035126
 protein coding gene Chr9:94255532-94264800 (-)
AKR/J MGP_AKRJ_G0017255
 protein coding gene Chr10:62594480-62594818 (-)
BALB/cJ MGP_BALBcJ_G0028104
 protein coding gene Chr4:31640611-31640952 (-)
C3H/HeJ MGP_C3HHeJ_G0017078
 protein coding gene Chr10:62517077-62518703 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016214
 protein coding gene Chr1:6342559-6343213 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0027288
 protein coding gene Chr4:32315843-32316184 (-)
CBA/J MGP_CBAJ_G0017050
 protein coding gene Chr10:67691173-67691511 (-)
DBA/2J MGP_DBA2J_G0017155
 protein coding gene Chr10:60247215-60247553 (-)
FVB/NJ MGP_FVBNJ_G0027915
 protein coding gene Chr4:30759085-30759426 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0027948
 protein coding gene Chr4:37532200-37532541 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017751
 protein coding gene Chr10:62429265-62430045 (-)
PWK/PhJ MGP_PWKPhJ_G0016432
 protein coding gene Chr10:60130304-60130642 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016214
 protein coding gene Chr10:61768034-61768336 (-)
WSB/EiJ MGP_WSBEiJ_G0027364
 protein coding gene Chr4:32220254-32220595 (-)



Homology
more
  • Human Ortholog
    RNF7, ring finger protein 7
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RNF7, ring finger protein 7
  • Synonyms
    CKBBP1, rbx2, ROC2, SAG
  • Links
    NCBI Gene ID: 9616
    neXtProt AC: NX_Q9UBF6
    UniProt: Q9UBF6

  • Chr Location
    3q23; chr3:141738249-141747560 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    10
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000048185 Ensembl Gene Model | MGI Sequence Detail 425 C57BL/6J ±  kb
transcript ENSMUST00000054760 Ensembl | MGI Sequence Detail 425 Not Applicable  
polypeptide ENSMUSP00000097258 Ensembl | MGI Sequence Detail 112 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR013083 Zinc finger, RING/FYVE/PHD-type
    IPR024766 Zinc finger, RING-H2-type
    IPR001841 Zinc finger, RING-type
Molecular
Reagents
less

  • Microarray probesets 2
References
more
  • Summaries
    All 14
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory