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Phf11b
Gene Detail
Symbol

Name
ID
Phf11b
PHD finger protein 11B
MGI:3645789
Synonyms
Gm4902
Feature Type
protein coding gene
Genetic Map
Chromosome 14
31.48 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr14:59320964-59341351 bp, - strand
From VEGA annotation of GRCm38

  20388 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:87807  Vertebrate Homology Class
1 human; 4 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken

Gene Tree: Phf11b

Human
homologs
Human Homolog PHF11, PHD finger protein 11
NCBI Gene ID 51131
neXtProt AC  NX_Q9UIL8
Human Synonyms  APY, BCAP, IGEL, IGER, IGHER, NYREN34, NY-REN-34
Human Chr (Location)  13q14.2; chr13:49495610-49528987 (+)  GRCh38
Disease Associations  (2) Diseases Associated with Human PHF11
Mutations,
alleles, and
phenotypes
Incidental mutations (data from APF )
Interactions
Phf11b interacts with 74 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
Expression
cDNA source data(2)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(2) cDNA(2)
Microarray probesets(1)
Other database
links
VEGA Gene ModelOTTMUSG00000043571 (Evidence)
Ensembl Gene ModelENSMUSG00000091649 (Evidence)
Entrez Gene236451 (Evidence)
UniGene247736
DFCITC1641313
DoTSDT.94298582
Consensus CDS ProjectCCDS49510.1
International Mouse Knockout Project StatusPhf11b
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000043571 VEGA Gene Model | MGI Sequence Detail 20388 C57BL/6J ±  kb
transcript OTTMUST00000114390 VEGA | MGI Sequence Detail 1184 Not Applicable 
polypeptide OTTMUSP00000063841 VEGA | MGI Sequence Detail 276 Not Applicable 

For the selected sequences
All sequences(22) RefSeq(9) UniProt(2)
Polymorphisms
SNPs within 2kb(106 from dbSNP Build 137)    SNPs within 2kb including multiple locations(124)
Protein-related
information
ResourceIDDescription
InterPro IPR001965 Zinc finger, PHD-type
InterPro IPR013083 Zinc finger, RING/FYVE/PHD-type
Protein Ontology PR:000012638 PHD finger protein 11
References
(Earliest) J:23000 MGD Nomenclature Committee, 2/14/1995;
(Latest) J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2014;
All references(16)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory