Gm6484
Gene Detail

Symbol Name ID

Gm6484 predicted gene 6484 MGI:3643534

Synonyms

Angptl8, Lipasin, Rifl

Feature Type

protein coding gene

Genetic Map

Chromosome 9

7.90 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

Chr9:21835510-21837346 bp, + strand From Ensembl annotation of GRCm38   1837 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:83285  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee

Gene Tree: Gm6484

Human homologs

Human Homolog		C19orf80, chromosome 19 open reading frame 80
NCBI Gene ID		55908
neXtProt AC		NX_Q6UXH0
Human Synonyms		ANGPTL8, PRO1185, PVPA599, RIFL, TD26
Human Chr (Location)		19p13.2; chr19:11350295-11352619 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(3) : Targeted(3)
 

Mice homozygous for a targeted mutation exhibit markedly reduced serum triglyceride levels.

 

Gene Ontology (GO) classifications

All GO classifications: (8 annotations)

Process	cell maturation, fat cell differentiation, ...
Component	extracellular region
Function	molecular_function

Expression

cDNA source data(10)
External Resources: GEO   ArrayExpress

Molecular reagents

All nucleic(10) cDNA(10)
Microarray probesets(1)

Other database links

Ensembl Gene Model	ENSMUSG00000047822 (Evidence)
Entrez Gene	624219 (Evidence)
UniGene	440264
DFCI	TC1601966, TC1649580
DoTS	DT.97345493
NIA Mouse Gene Index	U042958
Consensus CDS Project	CCDS40556.1
International Mouse Knockout Project Status	Gm6484

Sequences

Length	Strain/Species
genomic	ENSMUSG00000047822	Ensembl Gene Model | MGI Sequence Detail	1837	C57BL/6J
transcript	ENSMUST00000058777	Ensembl | MGI Sequence Detail	864	Not Applicable
polypeptide	ENSMUSP00000058951	Ensembl | MGI Sequence Detail	198	Not Applicable

All sequences(16) RefSeq(2) UniProt(2)

Polymorphisms

SNPs(9 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR026614	Hepatocellular carcinoma-associated protein TD26

References

(Earliest) J:161922 Tang T, et al., A mouse knockout library for secreted and transmembrane proteins. Nat Biotechnol. 2010 Jul;28(7):749-55
(Latest) J:192349 Quagliarini F, et al., Atypical angiopoietin-like protein that regulates ANGPTL3. Proc Natl Acad Sci U S A. 2012 Nov 27;109(48):19751-6
All references(24)