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Cyp2c54
Gene Detail
 Symbol
Name
ID
Cyp2c54
cytochrome P450, family 2, subfamily c, polypeptide 54
MGI:3642960
Feature Type protein coding gene
Genetic Map
Chromosome 19
34.24 cM, cytoband C3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr19:40037941-40073811 bp, - strand
From Ensembl annotation of GRCm38

  35871 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:137231  Vertebrate Homology Class
3 mouse

Protein SuperFamily: cytochrome P450 CYP2D6
Gene Tree: Cyp2c54

Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Interactions
Cyp2c54 interacts with 74 markers (Mir7-2, Mir7b, Mir19a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (15 annotations)
Process arachidonic acid metabolic process, linoleic acid metabolic process, ...
Component endoplasmic reticulum, intracellular membrane-bounded organelle, ...
Function arachidonic acid epoxygenase activity, aromatase activity, ...
Expression
cDNA source data(29)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(30) cDNA(29) Other(1)
Microarray probesets(1)
Other database
links
Ensembl Gene ModelENSMUSG00000067225 (Evidence)
Entrez Gene404195 (Evidence)
UniGene379575
NIA Mouse Gene IndexU090833
EC1.14.14.1
Consensus CDS ProjectCCDS29800.1
International Mouse Knockout Project StatusCyp2c54
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000067225 Ensembl Gene Model | MGI Sequence Detail 35871 C57BL/6J ±  kb
transcript ENSMUST00000048959 Ensembl | MGI Sequence Detail 1769 Not Applicable 
polypeptide ENSMUSP00000048284 Ensembl | MGI Sequence Detail 490 Not Applicable 

For the selected sequences
All sequences(17) RefSeq(4) UniProt(1)
Polymorphisms SNPs within 2kb(149 from dbSNP Build 137)    SNPs within 2kb including multiple locations(177)
Protein-related
information
ResourceIDDescription
InterPro IPR001128 Cytochrome P450
InterPro IPR017972 Cytochrome P450, conserved site
InterPro IPR002401 Cytochrome P450, E-class, group I
Protein Ontology PR:000006231 cytochrome P450 2C54
References (Earliest) J:113341 Wang H, et al., Cloning, expression, and characterization of three new mouse cytochrome p450 enzymes and partial characterization of their fatty acid oxidation activities. Mol Pharmacol. 2004 May;65(5):1148-58
(Latest) J:141632 Kasai F, et al., Emergence of complex rearrangements at translocation breakpoints in a transgenic mouse; implications for mechanisms involved in the formation of chromosome rearrangements. Cytogenet Genome Res. 2007;119(1-2):83-90
All references(15)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory