Appbp2os Gene Detail

Summary

• Symbol
  Appbp2os
• Name
  amyloid beta precursor protein binding protein 2, opposite strand
• Synonyms
  D630032N06Rik

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:3603817
  NCBI Gene: 654810
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:85125997-85129130 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 51.34 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  27 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3603817	antisense lncRNA gene	Chr11:85125992-85129130 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003025	antisense lncRNA gene	Chr11:86726508-86729994 (+)
A/J	MGP_AJ_G0003002	antisense lncRNA gene	Chr11:83404385-83407916 (+)
AKR/J	MGP_AKRJ_G0002983	antisense lncRNA gene	Chr11:85885055-85888563 (+)
BALB/cJ	MGP_BALBcJ_G0002989	antisense lncRNA gene	Chr11:83792903-83796432 (+)
C3H/HeJ	MGP_C3HHeJ_G0002945	antisense lncRNA gene	Chr11:85924500-85928032 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003131	antisense lncRNA gene	Chr11:89360565-89364101 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002670	antisense lncRNA gene	Chr11:80460288-80465123 (+)
CAST/EiJ	MGP_CASTEiJ_G0002915	antisense lncRNA gene	Chr11:86570394-86573893 (+)
CBA/J	MGP_CBAJ_G0002942	antisense lncRNA gene	Chr11:93161896-93165426 (+)
DBA/2J	MGP_DBA2J_G0002948	antisense lncRNA gene	Chr11:82978695-82982203 (+)
FVB/NJ	MGP_FVBNJ_G0002967	antisense lncRNA gene	Chr11:82466527-82470056 (+)
LP/J	MGP_LPJ_G0003024	antisense lncRNA gene	Chr11:87230225-87233756 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002955	antisense lncRNA gene	Chr11:93290842-93294370 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003135	antisense lncRNA gene	Chr11:86146228-86149757 (+)
PWK/PhJ	MGP_PWKPhJ_G0002874	antisense lncRNA gene	Chr11:83753766-83757281 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002819	antisense lncRNA gene	Chr11:85693625-85697175 (+)
WSB/EiJ	MGP_WSBEiJ_G0002945	antisense lncRNA gene	Chr11:85993351-85996881 (+)

Homology

• Gene Tree
  Appbp2os
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  22
• Chemically induced (other)
  1
• Gene trapped
  20
• Targeted
  1
• Genomic Mutations
  2 involving Appbp2os
• Find Mice (IMSR)
  5 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000085628 (Evidence)
• NCBI Gene
  654810

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085628	Ensembl Gene Model | MGI Sequence Detail	3134	C57BL/6J
transcript	ENSMUST00000136454	Ensembl | MGI Sequence Detail	635	Not Applicable
polypeptide	Q9CUT5	UniProt | EBI | MGI Sequence Detail	149	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 3

  cDNA 3

  
  

  Microarray probesets 2

References

• Summaries
  All 23

  Phenotypes 11
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52