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Rhox1 Gene Detail
Summary
  • Symbol
    Rhox1
  • Name
    reproductive homeobox 1
  • Feature Type
    protein coding gene
  • IDs
    MGI:3580237
    NCBI Gene: 385343
  • Member of
    Rhox cluster
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:36477457-36485911 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 21.63 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    9 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3580237
protein coding gene ChrX:36477457-36485911 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035637
protein coding gene ChrX:32165683-32177860 (-)
A/J MGP_AJ_G0035614
protein coding gene ChrX:32238397-32247568 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0035607
protein coding gene ChrX:31949715-31958696 (-)
C3H/HeJ MGP_C3HHeJ_G0035325
protein coding gene ChrX:32479331-32490301 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036143
protein coding gene ChrX:32803860-32812295 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033003
protein coding gene ChrX:30885065-30889668 (-)
CAST/EiJ MGP_CASTEiJ_G0034615
protein coding gene ChrX:20637739-20647440 (-)
CBA/J MGP_CBAJ_G0035294
protein coding gene ChrX:33675171-33686185 (-)
DBA/2J MGP_DBA2J_G0035445
protein coding gene ChrX:32046348-32054874 (-)
FVB/NJ MGP_FVBNJ_G0035392
protein coding gene ChrX:31808819-31817072 (-)
LP/J MGP_LPJ_G0035527
protein coding gene ChrX:32565606-32574113 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035436
protein coding gene ChrX:34107421-34123484 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036150
protein coding gene ChrX:32136204-32145822 (-)
PWK/PhJ MGP_PWKPhJ_G0034317
protein coding gene ChrX:20082860-20093451 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034158
protein coding gene ChrX:21112779-21121203 (-)
WSB/EiJ MGP_WSBEiJ_G0034751
protein coding gene ChrX:31930998-31939924 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 385343 NCBI Gene Model | MGI Sequence Detail 8455 C57BL/6J ±  kb
transcript NM_001025084 RefSeq | MGI Sequence Detail 883 C57BL/6  
polypeptide NP_001020255 RefSeq | MGI Sequence Detail 224 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR001356 Homeobox domain
    IPR009057 Homeobox-like domain superfamily
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 20
    Developmental Gene Expression 4
    Phenotypes 6
  • Earliest
    J:96937 Maclean JA 2nd, et al., Rhox: a new homeobox gene cluster. Cell. 2005 Feb 11;120(3):369-82
  • Latest
    J:240574 Song HW, et al., The Homeobox Transcription Factor RHOX10 Drives Mouse Spermatogonial Stem Cell Establishment. Cell Rep. 2016 Sep 27;17(1):149-64

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/18/2022
MGI 6.17
The Jackson Laboratory