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Rnase13
Gene Detail
Symbol

Name
ID
Rnase13
ribonuclease, RNase A family, 13 (non-active)
MGI:3528592
Feature Type
protein coding gene
Genetic Map
Chromosome 14
26.73 cM, cytoband B-C1
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr14:51922160-51922773 bp, - strand
From Ensembl annotation of GRCm38

  614 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:79130  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

HCOP human homology predictions: RNASE13
Protein SuperFamily: pyrimidine-specific ribonuclease/angiogenin
Gene Tree: Rnase13

Human
homologs
RNASE13, ribonuclease, RNase A family, 13 (non-active)
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 440163
neXtProt AC: NX_Q5GAN3

Human Synonyms: HEL-S-86p, RAL1

Human Chr (Location): 14q11.1; chr14:21032820-21034785 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
Incidental mutations (data from APF , CvDC )
Interactions
Rnase13 interacts with 2 markers (Mir214, Mir877)
Gene Ontology
(GO)
classifications
All GO classifications: (2 annotations)
Component extracellular region
Function nucleic acid binding
External Resources: FuncBase
Expression
cDNA source data(3)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(3) cDNA(3)
Microarray probesets(1)
Other database
links
Ensembl Gene Model ENSMUSG00000068392 (Evidence)
Entrez Gene 497071 (Evidence)
UniGene 378602
DoTS DT.110744694
NIA Mouse Gene Index U292184
Consensus CDS Project CCDS27048.1
International Mouse Phenotyping Consortium Status Rnase13
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000068392 Ensembl Gene Model | MGI Sequence Detail 614 C57BL/6J ±  kb
transcript ENSMUST00000089771 Ensembl | MGI Sequence Detail 614 Not Applicable 
polypeptide ENSMUSP00000087203 Ensembl | MGI Sequence Detail 153 Not Applicable 

For the selected sequences
All sequences(20) RefSeq(10) UniProt(1)
Polymorphisms
SNPs within 2kb(37 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001427 Ribonuclease A
InterPro IPR023412 Ribonuclease A-domain
Protein Ontology PR:000014045 ribonuclease-like protein 13
References
(Earliest) J:95949 Cho S, et al., The ribonuclease A superfamily of mammals and birds: identifying new members and tracing evolutionary histories. Genomics. 2005 Feb;85(2):208-20
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(16)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory