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Fbxo39 Gene Detail
Summary
  • Symbol
    Fbxo39
  • Name
    F-box protein 39
  • Synonyms
    1700010H23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3505735
    NCBI Gene: 628100
Location & Maps
more
  • Sequence Map
    Chr11:72314444-72319416 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      4973 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 44.00 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    FBXO39, F-box protein 39
  • Vertebrate Orthologs
    8
  • Human Ortholog
    FBXO39, F-box protein 39
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CT144, Fbx39
  • Links
    NCBI Gene ID: 162517
    neXtProt AC: NX_Q8N4B4

  • Chr Location
    17p13.1; chr17:6776175-6796474 (+)  GRCh38.p2

  • Human Ortholog
    XAF1, XIAP associated factor 1
    Orthology source: HGNC
  • Synonyms
    BIRC4BP, HSXIAPAF1, XIAPAF1
  • Links
    NCBI Gene ID: 54739
    neXtProt AC: NX_Q6GPH4

  • Chr Location
    17p13.1; chr17:6755572-6775647 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Targeted
    3
  • Genomic Mutations
    2 involving Fbxo39
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000006107 VEGA Gene Model | MGI Sequence Detail 4973 C57BL/6J ±  kb
transcript OTTMUST00000013803 VEGA | MGI Sequence Detail 1708 Not Applicable  
polypeptide OTTMUSP00000006401 VEGA | MGI Sequence Detail 443 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    55 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
Other
Accession IDs
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MGI:1917303
References
more
  • Summaries
    All 20
    Gene Ontology 1
    Phenotypes 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/22/2016
MGI 6.06
The Jackson Laboratory