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Vmo1 Gene Detail
Summary
  • Symbol
    Vmo1
  • Name
    vitelline membrane outer layer 1 homolog (chicken)
  • Synonyms
    LOC327956
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685587
    NCBI Gene: 327956
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:70404342-70405442 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 42.99 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    15 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685587
 protein coding gene Chr11:70404342-70405442 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018599
 protein coding gene Chr11:71048367-71049467 (-)
A/J MGP_AJ_G0018567
 protein coding gene Chr11:68354374-68355474 (-)
AKR/J MGP_AKRJ_G0018536
 protein coding gene Chr11:70408646-70409746 (-)
BALB/cJ MGP_BALBcJ_G0018539
 protein coding gene Chr11:68674767-68675867 (-)
C3H/HeJ MGP_C3HHeJ_G0018352
 protein coding gene Chr11:70434953-70436053 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018990
 protein coding gene Chr11:73201285-73202385 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016635
 protein coding gene Chr11:65276803-65277906 (-)
CAST/EiJ MGP_CASTEiJ_G0017907
 protein coding gene Chr11:70684645-70685745 (-)
CBA/J MGP_CBAJ_G0018324
 protein coding gene Chr11:76481350-76482450 (-)
DBA/2J MGP_DBA2J_G0018434
 protein coding gene Chr11:67937915-67939015 (-)
FVB/NJ MGP_FVBNJ_G0018424
 protein coding gene Chr11:67583035-67584135 (-)
LP/J MGP_LPJ_G0018504
 protein coding gene Chr11:71624026-71625126 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018447
 protein coding gene Chr11:77056708-77057808 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019032
 protein coding gene Chr11:70668297-70669397 (-)
PWK/PhJ MGP_PWKPhJ_G0017681
 protein coding gene Chr11:68578078-68579178 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017471
 protein coding gene Chr11:70482205-70483305 (-)
WSB/EiJ MGP_WSBEiJ_G0017961
 protein coding gene Chr11:70330360-70331460 (-)



Homology
more
  • Human Ortholog
    VMO1, vitelline membrane outer layer 1 homolog
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    VMO1, vitelline membrane outer layer 1 homolog
  • Synonyms
    ERGA6350, PRO21055
  • Links
    NCBI Gene ID: 284013
    neXtProt AC: NX_Q7Z5L0
    UniProt: Q7Z5L0

  • Chr Location
    17p13.2; chr17:4785285-4786433 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 327956 NCBI Gene Model | MGI Sequence Detail 1101 C57BL/6J ±  kb
transcript NM_001013607 RefSeq | MGI Sequence Detail 672 C57BL/6  
polypeptide Q5SXG7 UniProt | EBI | MGI Sequence Detail 201 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000017307 vitelline membrane outer layer protein 1
    (term hierarchy)
  • InterPro Domains
    IPR005515 Vitelline membrane outer layer protein I (VOMI)
    IPR036706 Vitelline membrane outer layer protein I (VOMI) superfamily
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 25
    Gene Ontology 1
    Phenotypes 11
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory