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Ercc6l Gene Detail
Summary
  • Symbol
    Ercc6l
  • Name
    excision repair cross-complementing rodent repair deficiency complementation group 6 like
  • Synonyms
    D330021P09Rik, MGC:7766
  • Feature Type
    protein coding gene
  • IDs
    MGI:2654144
    NCBI Gene: 236930
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:102142820-102157091 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 45.16 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    40 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2654144
protein coding gene ChrX:102141716-102157091 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035970
protein coding gene ChrX:98721438-98738089 (-)
A/J MGP_AJ_G0035955
protein coding gene ChrX:98675955-98691624 (-)
AKR/J MGP_AKRJ_G0035871
protein coding gene ChrX:101527908-101547371 (-)
BALB/cJ MGP_BALBcJ_G0035940
protein coding gene ChrX:97417623-97433506 (-)
C3H/HeJ MGP_C3HHeJ_G0035648
protein coding gene ChrX:99097487-99113776 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036468
protein coding gene ChrX:101638232-101659714 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033297
protein coding gene ChrX:96390776-96405244 (-)
CAST/EiJ MGP_CASTEiJ_G0034934
protein coding gene ChrX:83407728-83430572 (-)
CBA/J MGP_CBAJ_G0035622
protein coding gene ChrX:104794672-104809700 (-)
DBA/2J MGP_DBA2J_G0035776
protein coding gene ChrX:97899214-97915169 (-)
FVB/NJ MGP_FVBNJ_G0035715
protein coding gene ChrX:97259340-97275834 (-)
LP/J MGP_LPJ_G0035867
protein coding gene ChrX:99639662-99654639 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035749
protein coding gene ChrX:109320792-109335269 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036494
protein coding gene ChrX:98366433-98382802 (-)
PWK/PhJ MGP_PWKPhJ_G0034633
protein coding gene ChrX:80986781-81002537 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034461
protein coding gene ChrX:84320548-84337234 (-)
WSB/EiJ MGP_WSBEiJ_G0035073
protein coding gene ChrX:97080252-97095589 (-)



Homology
more
  • Human Ortholog
    ERCC6L, ERCC excision repair 6 like, spindle assembly checkpoint helicase
  • Vertebrate Orthologs
    9
  • Human Ortholog
    ERCC6L, ERCC excision repair 6 like, spindle assembly checkpoint helicase
    Orthology source: HomoloGene, HGNC
  • Synonyms
    PICH, RAD26L
  • Links
    NCBI Gene ID: 54821
    neXtProt AC: NX_Q2NKX8
    UniProt: Q2NKX8

  • Chr Location
    Xq13.1; chrX:72204657-72239008 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 236930 NCBI Gene Model | MGI Sequence Detail 14272 C57BL/6J ±  kb
transcript NM_146235 RefSeq | MGI Sequence Detail 4198 C57BL/6  
polypeptide Q8BHK9 UniProt | EBI | MGI Sequence Detail 1240 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 73
    cDNA 70
    Primer pair 2
    Other 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:2384292, MGI:2443488
References
more
  • Summaries
    All 26
    Developmental Gene Expression 2
    Gene Ontology 3
    Phenotypes 5
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory