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Hist1h4f Gene Detail
Summary
  • Symbol
    Hist1h4f
  • Name
    histone cluster 1, H4f
  • Feature Type
    protein coding gene
  • IDs
    MGI:2448425
    NCBI Gene: 319157
  • Gene Overview
    MyGene.info: HIST1H4J
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr13:23551286-23551643 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 9.78 cM, cytoband A2-A3
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    28 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2448425
protein coding gene Chr13:23551258-23551648 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020348
protein coding gene Chr13:20968199-20968589 (-)
A/J MGP_AJ_G0020303
protein coding gene Chr13:20590318-20591133 (-)
AKR/J MGP_AKRJ_G0020277
protein coding gene Chr13:20841876-20842366 (-)
BALB/cJ MGP_BALBcJ_G0020293
protein coding gene Chr13:20580460-20580850 (-)
C3H/HeJ MGP_C3HHeJ_G0020101
protein coding gene Chr13:20915572-20915962 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020735
protein coding gene Chr13:21736740-21737130 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018318
protein coding gene Chr13:19393107-19393502 (-)
CAST/EiJ MGP_CASTEiJ_G0019620
protein coding gene Chr13:20605041-20605431 (-)
CBA/J MGP_CBAJ_G0020052
protein coding gene Chr13:22580150-22580540 (-)
DBA/2J MGP_DBA2J_G0020177
protein coding gene Chr13:20133031-20133421 (-)
FVB/NJ MGP_FVBNJ_G0020164
protein coding gene Chr13:19777537-19777927 (-)
LP/J MGP_LPJ_G0020249
protein coding gene Chr13:21294154-21294544 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020193
protein coding gene Chr13:22889485-22889869 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020768
protein coding gene Chr13:20692076-20692466 (-)
PWK/PhJ MGP_PWKPhJ_G0019376
protein coding gene Chr13:20159855-20160253 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0019676
protein coding gene Chr13:20827869-20828259 (-)



Homology
more
  • Human Ortholog
    HIST1H4J, histone cluster 1 H4 family member j
  • Vertebrate Orthologs
    8
  • Human Ortholog
    HIST1H4J, histone cluster 1 H4 family member j
    Orthology source: HomoloGene
  • Synonyms
    dJ160A22.2, H4/e, H4F2iv, H4FE
  • Links
    NCBI Gene ID: 8363
    neXtProt AC: NX_P62805
    UniProt: P62805

  • Chr Location
    6p22.1; chr6:27824125-27824480 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 319157 NCBI Gene Model | MGI Sequence Detail 358 C57BL/6J ±  kb
transcript NM_175655 RefSeq | MGI Sequence Detail 358 C57BL/6  
polypeptide NP_783586 RefSeq | MGI Sequence Detail 103 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    Genomic 1
    cDNA 3
    Primer pair 1

    Microarray probesets 1
References
more
  • Summaries
    All 20
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 9
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:175731 Liu LJ, et al., Functional coupling of transcription factor HiNF-P and histone H4 gene expression during pre- and post-natal mouse development. Gene. 2011 Sep 1;483(1-2):1-10

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory