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H4c3 Gene Detail
Summary
  • Symbol
    H4c3
  • Name
    H4 clustered histone 3
  • Synonyms
    Hist1h4c
  • Feature Type
    protein coding gene
  • IDs
    MGI:2448421
    NCBI Gene: 319155
  • Member of
    Hist1 cluster
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:23882067-23882441 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 9.88 cM, cytoband A2-A3
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    121 from dbSNP Build 142
  • Strain Annotations
    5
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2448421
 protein coding gene Chr13:23881618-23882441 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0018329
 protein coding gene Chr13:19531028-19531421 (-)
CAST/EiJ ENSTCUG00005010191
 protein coding gene Chr13:20657815-20658637 (-)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
JF1/MsJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ ENSMSPG00010018062
 protein coding gene Chr13:19583944-19584325 (-)
WSB/EiJ ENSIUOG00005032125
 protein coding gene Chr13:19783241-19784060 (-)



Homology
more
  • Human Ortholog
    H4C1, H4 clustered histone 1
  • Vertebrate Orthologs
    31
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    H4C1, H4 clustered histone 1
  • Synonyms
    H4FA, HIST1H4A
  • Links
    NCBI Gene ID: 8359
    UniProt: P62805

  • Chr Location
    6p22.2; chr6:26021649-26022847 (+)  GRCh38
  • Human Ortholog
    H4C11, H4 clustered histone 11
  • Synonyms
    dJ160A22.2, H4/e, H4F2iv, H4FE, HIST1H4J, TEBIVANED2, TEVANED2
  • Links
    NCBI Gene ID: 8363
    UniProt: P62805

  • Chr Location
    6p22.1; chr6:27824092-27824480 (+)  GRCh38
  • Human Ortholog
    H4C12, H4 clustered histone 12
  • Synonyms
    dJ160A22.1, H4/d, H4F2iii, H4FD, HIST1H4K
  • Links
    NCBI Gene ID: 8362
    UniProt: P62805

  • Chr Location
    6p22.1; chr6:27830918-27831560 (-)  GRCh38
  • Human Ortholog
    H4C13, H4 clustered histone 13
  • Synonyms
    H4FK, H4.k, H4/k, HIST1H4L
  • Links
    NCBI Gene ID: 8368
    UniProt: P62805

  • Chr Location
    6p22.1; chr6:27873148-27873534 (-)  GRCh38
  • Human Ortholog
    H4C14, H4 clustered histone 14
  • Synonyms
    FO108, H4, H4F2, H4FN, H4/n, HIST2H4, HIST2H4A
  • Links
    NCBI Gene ID: 8370
    UniProt: P62805

  • Chr Location
    1q21.2; chr1:149832657-149839767 (+)  GRCh38
  • Human Ortholog
    H4C15, H4 clustered histone 15
  • Synonyms
    H4/o, HIST2H4B
  • Links
    NCBI Gene ID: 554313
    UniProt: P62805

  • Chr Location
    1q21.2; chr1:149844488-149861240 (-)  GRCh38
  • Human Ortholog
    H4C16, H4 histone 16
  • Synonyms
    H4-16, H4/p, HIST4H4
  • Links
    NCBI Gene ID: 121504
    UniProt: P62805

  • Chr Location
    12p12.3; chr12:14767999-14771131 (-)  GRCh38
  • Human Ortholog
    H4C2, H4 clustered histone 2
  • Synonyms
    H4FI, H4/I, HIST1H4B
  • Links
    NCBI Gene ID: 8366
    UniProt: P62805

  • Chr Location
    6p22.2; chr6:26025802-26027283 (-)  GRCh38
  • Human Ortholog
    H4C3, H4 clustered histone 3
  • Synonyms
    dJ221C16.1, H4FG, H4/g, HIST1H4C, TEBIVANED1, TEVANED1
  • Links
    NCBI Gene ID: 8364
    UniProt: P62805

  • Chr Location
    6p22.2; chr6:26103933-26104337 (+)  GRCh38
  • Human Ortholog
    H4C4, H4 clustered histone 4
  • Synonyms
    dJ221C16.9, H4/b, H4FB, HIST1H4D
  • Links
    NCBI Gene ID: 8360
    UniProt: P62805

  • Chr Location
    6p22.2; chr6:26188710-26189112 (-)  GRCh38
  • Human Ortholog
    H4C5, H4 clustered histone 5
  • Synonyms
    H4FJ, H4/j, HIST1H4E, TEBIVANED3, TEVANED3
  • Links
    NCBI Gene ID: 8367
    UniProt: P62805

  • Chr Location
    6p22.2; chr6:26204610-26205021 (+)  GRCh38
  • Human Ortholog
    H4C6, H4 clustered histone 6
  • Synonyms
    H4, H4/c, H4FC, HIST1H4F
  • Links
    NCBI Gene ID: 8361
    UniProt: P62805

  • Chr Location
    6p22.2; chr6:26240393-26240793 (+)  GRCh38
  • Human Ortholog
    H4C8, H4 clustered histone 8
  • Synonyms
    H4FH, H4/h, HIST1H4H
  • Links
    NCBI Gene ID: 8365
    UniProt: P62805

  • Chr Location
    6p22.2; chr6:26277609-26285638 (-)  GRCh38
  • Human Ortholog
    H4C9, H4 clustered histone 9
  • Synonyms
    H4FM, H4/m, H4M, HIST1H4I, TEBIVANED4, TEVANED4
  • Links
    NCBI Gene ID: 8294
    UniProt: P62805

  • Chr Location
    6p22.1; chr6:27139282-27140640 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    9 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    673
  • Tissues
    38
  • cDNA Data
    8
  • Literature Summary
    12
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 319155 NCBI Gene Model | MGI Sequence Detail 375 C57BL/6J ±  kb
transcript NM_178208 RefSeq | MGI Sequence Detail 375 C57BL/6  
polypeptide P62806 UniProt | EBI | MGI Sequence Detail 103 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 14
    Genomic 2
    cDNA 8
    Primer pair 1
    Other 3

    Microarray probesets 1
Other
Accession IDs
less
MGI:6324970
References
more
  • Summaries
    All 45
    Developmental Gene Expression 12
    Phenotypes 9
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:320332 Kujirai T, et al., Transcription through the nucleosome. Curr Opin Struct Biol. 2020 Apr;61:42-49
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory