About   Help   FAQ
Trappc11 Gene Detail
Summary
  • Symbol
    Trappc11
  • Name
    trafficking protein particle complex 11
  • Synonyms
    D030016E14Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444585
    NCBI Gene: 320714
  • Alliance
    genome feature page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:47943163-47986505 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 26.86 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1416 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444585
 protein coding gene Chr8:47943150-47986505 (-)
129S1/SvImJ ENSMUSG00200005566
 protein coding gene Chr8:43032564-43075946 (-)
A/J ENSMUSG00195003918
 protein coding gene Chr8:43561477-43604830 (-)
AKR/J ENSMUSG00220003607
 protein coding gene Chr8:43362939-43406292 (-)
BALB/cJ ENSMUSG00180002612
 protein coding gene Chr8:43102431-43145786 (-)
C3H/HeJ ENSMUSG00175005006
 protein coding gene Chr8:43224028-43267380 (-)
C57BL/6NJ ENSMUSG00215008399
 protein coding gene Chr8:43033497-43076853 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031040
 protein coding gene Chr8:41065127-41108094 (-)
CAST/EiJ ENSTCUG00005019158
 protein coding gene Chr8:43047951-43091610 (-)
CBA/J ENSMUSG00210018958
 protein coding gene Chr8:43101024-43144406 (-)
DBA/2J ENSMUSG00185005827
 protein coding gene Chr8:48988012-49031364 (-)
FVB/NJ ENSMUSG00205002536
 protein coding gene Chr8:42230693-42274083 (-)
JF1/MsJ ENSUMUG00000004615
 protein coding gene Chr8:50594255-50637771 (-)
LP/J ENSMUSG00230013911
 protein coding gene Chr8:52639801-52683185 (-)
NOD/ShiLtJ ENSMUSG00190006037
 protein coding gene Chr8:43139627-43182977 (-)
NZO/HlLtJ ENSMUSG00225011782
 protein coding gene Chr8:56228458-56271842 (-)
PWK/PhJ ENSLUMG00010009107
 protein coding gene Chr8:42855154-42898503 (-)
SPRET/EiJ ENSMSPG00010005850
 protein coding gene Chr8:43758544-43801385 (-)
WSB/EiJ ENSIUOG00005002530
 protein coding gene Chr8:43958153-44001770 (-)



Homology
more
  • Human Ortholog
    TRAPPC11, trafficking protein particle complex subunit 11
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRAPPC11, trafficking protein particle complex subunit 11
  • Synonyms
    C4orf41, FOIGR, GRY, LGMD2S, LGMDR18
  • Links
    NCBI Gene ID: 60684
    UniProt: Q7Z392

  • Chr Location
    4q35.1; chr4:183659267-183713594 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human TRAPPC11 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    4
  • Gene trapped
    3
  • Genomic Mutations
    1 involving Trappc11
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    54 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    17
  • GO References
    4
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    95
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 320714 NCBI Gene Model | MGI Sequence Detail 43343 C57BL/6J ±  kb
transcript NM_177240 RefSeq | MGI Sequence Detail 4338 C57BL/6  
polypeptide B2RXC1 UniProt | EBI | MGI Sequence Detail 1133 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000031520 trafficking protein particle complex subunit 11
    (term hierarchy)
  • InterPro Domains
    IPR021773 Trafficking protein particle complex subunit 11
    IPR025876 Trafficking protein particle complex subunit 11, C-terminal
    IPR063291 Trafficking protein particle complex subunit 11, N-terminal domain
    IPR063135 TRAPPC11, first Ig-like domain
    IPR063114 TRAPPC11, second Ig-like domain
    IPR063187 TRAPPC11, third Ig-like domain
  • GlyGen
    B2RXC1 1 site, 1 O-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 95
    cDNA 95

    Microarray probesets 4
Other
Accession IDs
less
MGI:2142812, MGI:2142898
References
more
  • Summaries
    All 33
    Gene Ontology 4
    Phenotypes 10
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory