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Taf2
Gene Detail
Symbol

Name
ID
Taf2
TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor
MGI:2443028
Synonyms
150kDa, 4732460C16Rik, CIF150, TAF2B, TAFII150
Feature Type
protein coding gene
Genetic Map
Chromosome 15
21.96 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr15:55015129-55072152 bp, - strand
From Ensembl annotation of GRCm38

  57024 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:31137  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Taf2

Human
homologs
Human Homolog TAF2, TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa
NCBI Gene ID 6873
neXtProt AC  NX_Q6P1X5
Human Synonyms  CIF150, MRT40, TAF2B, TAFII150
Human Chr (Location)  8q24.12; chr8:119730774-119832863 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human TAF2
Mutations,
alleles, and
phenotypes
All mutations/alleles(9) : Gene trapped(4) Targeted(5)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Taf2 interacts with 211 markers (Mir7-1, Mir7-2, Mir7b, ...)
Expression
Literature Summary: (3 records)
Data Summary: Results (24)    Tissues (15)    Images (2)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 24
cDNA source data(96)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(96) cDNA(96)
Microarray probesets(2)
Other database
links
Ensembl Gene ModelENSMUSG00000037343 (Evidence)
Entrez Gene319944 (Evidence)
UniGene380957
DoTSDT.527696, DT.91412145, DT.482156, DT.101221419, DT.97403441
NIA Mouse Gene IndexU036176
Consensus CDS ProjectCCDS37075.1
International Mouse Knockout Project StatusTaf2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000037343 Ensembl Gene Model | MGI Sequence Detail 57024 C57BL/6J ±  kb
transcript ENSMUST00000041733 Ensembl | MGI Sequence Detail 5033 Not Applicable 
polypeptide ENSMUSP00000043733 Ensembl | MGI Sequence Detail 1198 Not Applicable 

For the selected sequences
All sequences(28) RefSeq(6) UniProt(3)
Polymorphisms
SNPs within 2kb(288 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR016024 Armadillo-type fold
InterPro IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal
Protein Ontology PR:000016025 transcription initiation factor TFIID subunit 2
References
(Earliest) J:78343 Loebel DA, et al., Isolation of differentially expressed genes from wild-type and Twist mutant mouse limb buds. Genesis. 2002 Jul;33(3):103-13
(Latest) J:181994 Kamileri I, et al., Defective transcription initiation causes postnatal growth failure in a mouse model of nucleotide excision repair (NER) progeria. Proc Natl Acad Sci U S A. 2012 Feb 21;109(8):2995-3000
All references(32)
Other
accession IDs
MGI:2145997

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory