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Clptm1l Gene Detail
Summary
  • Symbol
    Clptm1l
  • Name
    CLPTM1-like
  • Synonyms
    C130052I12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442892
    NCBI Gene: 218335
  • Gene Overview
    MyGene.info: CLPTM1L
Location & Maps
more
  • Sequence Map
    Chr13:73604002-73620639 bp, + strand
  • From NCBI annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      16638 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 40.12 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CLPTM1L, CLPTM1 like
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CLPTM1L, CLPTM1 like
    Orthology source: HGNC, HomoloGene
  • Synonyms
    CRR9
  • Links
    NCBI Gene ID: 81037
    neXtProt AC: NX_Q96KA5

  • Chr Location
    5p15.33; chr5:1317755-1345065 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Targeted
    2
  • Genomic Mutations
    1 involving Clptm1l
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 218335 NCBI Gene Model | MGI Sequence Detail 16638 C57BL/6J ±  kb
transcript NM_146047 RefSeq | MGI Sequence Detail 2378 C57BL/6  
polypeptide Q8BXA5 UniProt | EBI | MGI Sequence Detail 539 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    127 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000005603 cleft lip and palate transmembrane protein 1-like protein
  • InterPro Domains
    IPR008429 Cleft lip and palate transmembrane 1
    IPR030434 Cleft lip and palate transmembrane protein 1-like protein
Molecular
Reagents
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  • All nucleic 102
    cDNA 102

    Microarray probesets 4
References
more
  • Summaries
    All 28
    Developmental Gene Expression 3
    Gene Ontology 3
    Phenotypes 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:193822 Lumayag S, et al., Inactivation of the microRNA-183/96/182 cluster results in syndromic retinal degeneration. Proc Natl Acad Sci U S A. 2013 Feb 5;110(6):E507-16

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory