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Dclre1c Gene Detail
Summary
  • Symbol
    Dclre1c
  • Name
    DNA cross-link repair 1C
  • Synonyms
    9930121L06Rik, Art, Artemis
  • Feature Type
    protein coding gene
  • IDs
    MGI:2441769
    NCBI Gene: 227525
  • Gene Overview
    MyGene.info: DCLRE1C
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:3424131-3464130 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 1.93 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    281 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2441769
protein coding gene Chr2:3424062-3474211 (.)
129S1/SvImJ MGP_129S1SvImJ_G0025308
protein coding gene Chr2:395070-446306 (+)
A/J MGP_AJ_G0025284
protein coding gene Chr2:376061-417570 (+)
AKR/J MGP_AKRJ_G0025253
protein coding gene Chr2:385399-426843 (+)
BALB/cJ MGP_BALBcJ_G0025280
protein coding gene Chr2:367266-406921 (+)
C3H/HeJ MGP_C3HHeJ_G0025040
protein coding gene Chr2:396146-438105 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025723
protein coding gene Chr2:389310-433035 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023137
protein coding gene Chr2:323712-362885 (+)
CAST/EiJ MGP_CASTEiJ_G0024504
protein coding gene Chr2:396572-441567 (+)
CBA/J MGP_CBAJ_G0025020
protein coding gene Chr2:415864-462013 (+)
DBA/2J MGP_DBA2J_G0025151
protein coding gene Chr2:360954-400471 (+)
FVB/NJ MGP_FVBNJ_G0025113
protein coding gene Chr2:370390-411052 (+)
LP/J MGP_LPJ_G0025238
protein coding gene Chr2:397641-439071 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025146
protein coding gene Chr2:395848-436405 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025781
protein coding gene Chr2:384746-425776 (+)
PWK/PhJ MGP_PWKPhJ_G0024253
protein coding gene Chr2:359745-400879 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024055
protein coding gene Chr2:413561-455857 (+)
WSB/EiJ MGP_WSBEiJ_G0024574
protein coding gene Chr2:392644-432684 (+)



Homology
more
  • Human Ortholog
    DCLRE1C, DNA cross-link repair 1C
  • Vertebrate Orthologs
    10
  • Human Ortholog
    DCLRE1C, DNA cross-link repair 1C
    Orthology source: HGNC, HomoloGene
  • Synonyms
    A-SCID, DCLREC1C, RS-SCID, SCIDA, SNM1C
  • Links
    NCBI Gene ID: 64421
    neXtProt AC: NX_Q96SD1
    UniProt: Q96SD1

  • Chr Location
    10p13; chr10:14897853-14954432 (-)  GRCh38.p7

Human Diseases
more
  • Diseases
    1 with Dclre1c mouse models; 2 with human DCLRE1C associations

Human Disease Mouse Models
      
IDs
View 2 models
      
IDs
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    2 with disease annotations
  • References
    2 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    60 phenotypes from 11 alleles in 12 genetic backgrounds
    33 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Homozygous mutant mice exhibit a combined immunodeficiency phenotype. While immunoglobulin rearrangement is completely blocked in B cells, the block of V(D)J rearrangement in T cells is partial.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000026648 Ensembl Gene Model | MGI Sequence Detail 40000 C57BL/6J ±  kb
transcript ENSMUST00000102988 Ensembl | MGI Sequence Detail 2469 Not Applicable  
polypeptide ENSMUSP00000100053 Ensembl | MGI Sequence Detail 705 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    4 Sequences
  • EC
  • InterPro Domains
    IPR011084 DNA repair metallo-beta-lactamase
    IPR001279 Metallo-beta-lactamase
    IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like
Molecular
Reagents
less
  • All nucleic 16
    cDNA 16

    Microarray probesets 2
Other
Accession IDs
less
MGI:2139032
References
more
  • Summaries
    All 65
    Diseases 2
    Gene Ontology 8
    Phenotypes 33
  • Earliest
    J:181755 Rigaut G, et al., A generic protein purification method for protein complex characterization and proteome exploration. Nat Biotechnol. 1999 Oct;17(10):1030-2
  • Latest
    J:245675 Spehalski E, et al., MRE11 Promotes Tumorigenesis by Facilitating Resistance to Oncogene-Induced Replication Stress. Cancer Res. 2017 Oct 01;77(19):5327-5338

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory