About   Help   FAQ
B3gat2
Gene Detail
Symbol

Name
ID
B3gat2
beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
MGI:2389490
Synonyms
GlcAT-S
Feature Type
protein coding gene
Genetic Map
Chromosome 1
9.75 cM, cytoband A4-B
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:23761753-23849158 bp, + strand
From VEGA annotation of GRCm38

  87406 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:50574  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: beta-1,3-glucuronyltransferase
Gene Tree: B3gat2

Human
homologs
Human Homolog B3GAT2, beta-1,3-glucuronyltransferase 2
NCBI Gene ID 135152
neXtProt AC  NX_Q9NPZ5
Human Synonyms  GLCATS
Human Chr (Location)  6q13; chr6:70861366-70957085 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Incidental mutations (data from APF )
Interactions
B3gat2 interacts with 435 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (2 records)
Data Summary: Results (101)    Tissues (100)    Images (7)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
RT-PCR 7
cDNA source data(5)
External Resources: Allen Institute   GENSAT   GEO   Expression Atlas
Molecular
reagents
All nucleic(7) cDNA(5) Primer pair(2)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000026519 (Evidence)
Ensembl Gene ModelENSMUSG00000026156 (Evidence)
Entrez Gene280645 (Evidence)
NIA Mouse Gene IndexU000104
EC2.4.1.135
Consensus CDS ProjectCCDS14850.1
International Mouse Knockout Project StatusB3gat2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026519 VEGA Gene Model | MGI Sequence Detail 87406 C57BL/6J ±  kb
transcript OTTMUST00000065597 VEGA | MGI Sequence Detail 5655 Not Applicable 
polypeptide OTTMUSP00000032711 VEGA | MGI Sequence Detail 324 Not Applicable 

For the selected sequences
All sequences(32) RefSeq(2) UniProt(4)
Polymorphisms
SNPs within 2kb(709 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR005027 Glycosyl transferase, family 43
Protein Ontology PR:000004589 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2
References
(Earliest) J:75411 Yamamoto S, et al., Molecular cloning and genomic analysis of mouse glucuronyltransferase involved in biosynthesis of the HNK-1 epitope. J Biochem. 2002 Mar;131(3):337-47
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(30)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
10/08/2014
MGI 5.20
The Jackson Laboratory