BC027072
Gene Detail

Symbol Name ID

BC027072 cDNA sequence BC027072 MGI:2385061

Synonyms

MGC:38716

Feature Type

protein coding gene

Genetic Map

Chromosome 17

42.67 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

Chr17:71743557-71752885 bp, - strand From Ensembl annotation of GRCm38   9329 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:19792  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: BC027072

Human homologs

Human Homolog		C2orf71, chromosome 2 open reading frame 71
NCBI Gene ID		388939
neXtProt AC		NX_A6NGG8
Human Chr (Location)		2p23.2; chr2:29284556-29297127 (-)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human C2orf71

Gene Ontology (GO) classifications

All GO classifications: (5 annotations)

Process	response to stimulus, visual perception
Component	cell projection, cilium
Function	molecular_function

External Resources: FuncBase

Expression

Literature Summary: (1 records)
Data Summary: Results (3)    Tissues (2)   
Theiler Stages: 22, 28

Assay Type	Results
RT-PCR	3

cDNA source data(15)
External Resources: GEO   ArrayExpress

Molecular reagents

All nucleic(16) cDNA(15) Primer pair(1)
Microarray probesets(2)

Other database links

Ensembl Gene Model	ENSMUSG00000044375 (Evidence)
Entrez Gene	225004 (Evidence)
UniGene	134151
DFCI	TC1586325
DoTS	DT.91334753
NIA Mouse Gene Index	U038043
Consensus CDS Project	CCDS28962.1
International Mouse Knockout Project Status	BC027072

Sequences

Length	Strain/Species
genomic	ENSMUSG00000044375	Ensembl Gene Model | MGI Sequence Detail	9329	C57BL/6J
transcript	ENSMUST00000057405	Ensembl | MGI Sequence Detail	5004	Not Applicable
polypeptide	ENSMUSP00000051871	Ensembl | MGI Sequence Detail	1279	Not Applicable

All sequences(14) RefSeq(2) UniProt(1)

Polymorphisms

SNPs(86 from dbSNP Build 128)

References

(Earliest) J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
(Latest) J:169201 Collin RW, et al., Mutations in C2ORF71 cause autosomal-recessive retinitis pigmentosa. Am J Hum Genet. 2010 May 14;86(5):783-8
All references(20)