Serpina3b MGI Mouse Gene Detail - MGI:2182835 - serine (or cysteine) peptidase inhibitor, clade A, member 3B

Symbol

Serpina3b
Name

serine (or cysteine) peptidase inhibitor, clade A, member 3B
Synonyms

6A1, A030003A19Rik, alpha-1 antiproteinase, antitrypsin

Feature Type

protein coding gene
IDs

MGI:2182835
NCBI Gene: 271047
Alliance

gene page
Transcription Start Sites

1 TSS

Sequence Map

Chr12:104094255-104105804 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 12, 53.40 cM, cytoband F1
Mapping Data

2 experiments

SNPs within 2kb

232 from dbSNP Build 142
Strain Annotations

17

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2182835	protein coding gene	Chr12:104094245-104105805 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0020068	protein coding gene	Chr12:105885463-105897724 (+)
A/J	MGP_AJ_G0020022	protein coding gene	Chr12:101894245-101905794 (+)
AKR/J	MGP_AKRJ_G0019999	protein coding gene	Chr12:104754626-104766065 (+)
BALB/cJ	MGP_BALBcJ_G0020008	protein coding gene	Chr12:102207261-102218700 (+)
C3H/HeJ	MGP_C3HHeJ_G0019812	protein coding gene	Chr12:105260427-105271976 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0020455	protein coding gene	Chr12:109199680-109211223 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0018071	protein coding gene	Chr12:98574378-98584610 (+)
CAST/EiJ	MGP_CASTEiJ_G0019352	protein coding gene	Chr12:100018317-100029872 (+)
CBA/J	MGP_CBAJ_G0019778	protein coding gene	Chr12:113272812-113284251 (+)
DBA/2J	MGP_DBA2J_G0019895	protein coding gene	Chr12:101329008-101341247 (+)
FVB/NJ	MGP_FVBNJ_G0019881	protein coding gene	Chr12:100154564-100166415 (+)
LP/J	MGP_LPJ_G0019970	protein coding gene	Chr12:105726879-105738428 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0020483	protein coding gene	Chr12:104239653-104251202 (+)
PWK/PhJ	MGP_PWKPhJ_G0019116	protein coding gene	Chr12:95875273-95886751 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0018916	protein coding gene	Chr12:98440235-98450892 (+)
WSB/EiJ	MGP_WSBEiJ_G0019411	protein coding gene	Chr12:105110426-105127345 (+)

Human Ortholog

SERPINA3, serpin family A member 3

Vertebrate Orthologs

7

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

SERPINA3, serpin family A member 3
Synonyms

AACT, ACT, GIG24, GIG25
Links

HGNC:16

NCBI Gene ID: 12

neXtProt AC: NX_P01011

UniProt: P01011
Chr Location

14q32.13; chr14:94612384-94624055 (+) GRCh38

MGI Vertebrate Homology

Serpina3b stringent orthology
1 human;1 mouse;1 rat;5 zebrafish
HCOP

vertebrate homology predictions: SERPINA3
Gene Tree

Serpina3b

Diseases

3 with human SERPINA3 associations

				Human Disease	Mouse Models
				chronic obstructive pulmonary disease IDs chronic obstructive pulmonary disease DOID:3083 DOID:11500 DOID:6144 EFO:0000341 ICD10CM:J44.9 MESH:D029424 NCI:C3199 OMIM:606963 UMLS_CUI:C0024117
				cystic fibrosis IDs cystic fibrosis DOID:1485 DOID:12447 DOID:13383 DOID:14395 DOID:1484 ICD10CM:E84 ICD9CM:277.0 MESH:D003550 NCI:C2975 OMIM:219700 ORDO:586 UMLS_CUI:C0010674
				vasculitis IDs vasculitis DOID:865 MESH:D014657 NCI:C26912 UMLS_CUI:C0042384

Click on a disease name to see all genes associated with that disease.

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Phenotype Summary

4 phenotype references

All Mutations and Alleles

3
Chemically induced (other)

1
Targeted

2
Genomic Mutations

1 involving Serpina3b
Incidental Mutations

Mutagenetix , APF
Find Mice (IMSR)

23 strains or lines available

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All GO Annotations

4
GO References

2

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	non-membrane-bounded organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

706
cDNA Data

5

Tissue x Stage Matrix

Other Mouse Links

Allen Institute

GEO

Expression Atlas

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All Sequences

33
RefSeq

6
UniProt

2
CCDS

CCDS26147.1

Ensembl

ENSMUSG00000066364 (Evidence)
NCBI Gene

271047

			Length	Strain/Species	Flank
genomic	ENSMUSG00000066364	Ensembl Gene Model \| MGI Sequence Detail	11550	C57BL/6J	± kb
transcript	ENSMUST00000085052	Ensembl \| MGI Sequence Detail	2070	Not Applicable
polypeptide	ENSMUSP00000082127	Ensembl \| MGI Sequence Detail	420	Not Applicable

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UniProt

2 Sequences
Protein Ontology

PR:000015934 serine protease inhibitor A3B

(term hierarchy)
InterPro Domains

IPR023796 Serpin domain

IPR000215 Serpin family

IPR036186 Serpin superfamily

IPR042178 Serpin superfamily, domain 1

IPR042185 Serpin superfamily, domain 2

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All nucleic 5

cDNA 5

Microarray probesets 1

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MGI:3045329

Summaries

All 22

Gene Ontology 2

Phenotypes 4
Earliest

J:25107 Inglis JD, et al., The murine Spi-2 proteinase inhibitor locus: a multigene family with a hypervariable reactive site domain. EMBO J. 1991 Feb;10(2):255-61
Latest

J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

TSS for Serpina3b:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr114832	Chr12:104094254-104094261 (+)	3 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 04/09/2024 MGI 6.23