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Zscan5b Gene Detail
Summary
  • Symbol
    Zscan5b
  • Name
    zinc finger and SCAN domain containing 5B
  • Synonyms
    Zfg1, Zfp371
  • Feature Type
    protein coding gene
  • IDs
    MGI:2159640
    NCBI Gene: 170734
Location & Maps
more
  • Genetic Map
    Chromosome 7, 3.61 cM, cytoband A1
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    ZSCAN5B, zinc finger and SCAN domain containing 5B
  • Vertebrate Orthologs
    15
  • Human Ortholog
    ZSCAN5B, zinc finger and SCAN domain containing 5B
    Orthology source: HGNC, HomoloGene
  • Synonyms
    ZNF371, ZNF495B
  • Links
    NCBI Gene ID: 342933
    neXtProt AC: NX_A6NJL1

  • Chr Location
    19q13.43; chr19:56189689-56208038 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027096 VEGA Gene Model | MGI Sequence Detail 17146 C57BL/6J ±  kb
transcript OTTMUST00000067015 VEGA | MGI Sequence Detail 1980 Not Applicable  
polypeptide OTTMUSP00000033664 VEGA | MGI Sequence Detail 468 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    76 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
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  • All nucleic 18
    cDNA 17
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 21
    Developmental Gene Expression 3
    Gene Ontology 1
  • Earliest
    J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/23/2016
MGI 6.05
The Jackson Laboratory