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Pip4k2c Gene Detail
Summary
  • Symbol
    Pip4k2c
  • Name
    phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
  • Synonyms
    Pip5k2c
  • Feature Type
    protein coding gene
  • IDs
    MGI:2152214
    NCBI Gene: 117150
  • Gene Overview
    MyGene.info: PIP4K2C
Location & Maps
more
  • Sequence Map
    Chr10:127197067-127211622 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      14556 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 74.50 cM, cytoband D3
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    PIP4K2C, phosphatidylinositol-5-phosphate 4-kinase type 2 gamma
  • Vertebrate Orthologs
    10
  • Human Ortholog
    PIP4K2C, phosphatidylinositol-5-phosphate 4-kinase type 2 gamma
    Orthology source: HomoloGene, HGNC
  • Synonyms
    PIP5K2C
  • Links
    NCBI Gene ID: 79837
    neXtProt AC: NX_Q8TBX8

  • Chr Location
    12q13.3; chr12:57591159-57603428 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000025417 Ensembl Gene Model | MGI Sequence Detail 14556 C57BL/6J ±  kb
transcript ENSMUST00000013970 Ensembl | MGI Sequence Detail 3374 Not Applicable  
polypeptide ENSMUSP00000013970 Ensembl | MGI Sequence Detail 421 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    100 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000012743 phosphatidylinositol 5-phosphate 4-kinase type-2 gamma
  • EC
  • InterPro Domains
    IPR023610 Phosphatidylinositol-4-phosphate 5-kinase
    IPR002498 Phosphatidylinositol-4-phosphate 5-kinase, core
    IPR027483 Phosphatidylinositol-4-phosphate 5-kinase, C-terminal
    IPR027484 Phosphatidylinositol-4-phosphate 5-kinase, N-terminal domain
Molecular
Reagents
less
  • All nucleic 128
    cDNA 126
    Primer pair 1
    Other 1

    Microarray probesets 5
References
more
  • Summaries
    All 29
    Developmental Gene Expression 3
    Gene Ontology 4
    Phenotypes 5
  • Earliest
    J:75718 Akiba Y, et al., Localization of mRNAs for phosphatidylinositol phosphate kinases in the mouse brain during development. Brain Res Gene Expr Patterns. 2002 Jan;1(2):123-33
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/22/2016
MGI 6.06
The Jackson Laboratory