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Krtap5-5 Gene Detail
Summary
  • Symbol
    Krtap5-5
  • Name
    keratin associated protein 5-5
  • Synonyms
    A030001H12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2149673
    NCBI Gene: 114666
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr7:142228795-142229971 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 87.78 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    37 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2149673
protein coding gene Chr7:142228795-142229971 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033246
protein coding gene Chr7:147351530-147352789 (-)
A/J MGP_AJ_G0033231
protein coding gene Chr7:143211714-143212731 (-)
AKR/J MGP_AKRJ_G0033163
protein coding gene Chr7:147211757-147213080 (-)
BALB/cJ MGP_BALBcJ_G0033232
protein coding gene Chr7:142965101-142966280 (-)
C3H/HeJ MGP_C3HHeJ_G0032947
protein coding gene Chr7:146945832-146946927 (-)
C57BL/6NJ MGP_C57BL6NJ_G0033742
protein coding gene Chr7:152801324-152804059 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030717
protein coding gene Chr7:144389345-144390618 (-)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0032918
protein coding gene Chr7:158005677-158008349 (-)
DBA/2J MGP_DBA2J_G0033072
protein coding gene Chr7:141134687-141135851 (+)
FVB/NJ MGP_FVBNJ_G0033022
protein coding gene Chr7:141069777-141070794 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0033056
protein coding gene Chr7:158620921-158622128 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0031827
protein coding gene Chr7:132973599-132974817 (-)
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    KRTAP5-5, keratin associated protein 5-5
  • Human Ortholog
    KRTAP5-5, keratin associated protein 5-5
    Orthology source: HGNC
  • Synonyms
    KRTAP5-11, KRTAP5.5
  • Links
    NCBI Gene ID: 439915
    neXtProt AC: NX_Q701N2
    UniProt: Q701N2

  • Chr Location
    11p15.5; chr11:1629803-1630930 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 114666 NCBI Gene Model | MGI Sequence Detail 1177 C57BL/6J ±  kb
transcript NM_001037822 RefSeq | MGI Sequence Detail 1177 Not Specified  
polypeptide Q2TA51 UniProt | EBI | MGI Sequence Detail 241 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR002494 Keratin-associated protein
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 4
Other
Accession IDs
less
MGI:2142002, MGI:2142296
References
more
  • Summaries
    All 26
    Gene Ontology 3
    Phenotypes 3
  • Earliest
    J:65007 Cattanach BM, et al., Two imprinted gene mutations: three phenotypes. Hum Mol Genet. 2000 Sep 22;9(15):2263-73
  • Latest
    J:202604 Nagamachi A, et al., Haploinsufficiency of SAMD9L, an endosome fusion facilitator, causes myeloid malignancies in mice mimicking human diseases with monosomy 7. Cancer Cell. 2013 Sep 9;24(3):305-17

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory