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E430025E21Rik
Gene Detail
Symbol

Name
ID
E430025E21Rik
RIKEN cDNA E430025E21 gene
MGI:2146110
Synonyms
mKIAA0196, strumpellin
Feature Type
protein coding gene
Genetic Map
Chromosome 15
25.17 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr15:59331997-59374152 bp, - strand
From NCBI annotation of GRCm38

  42156 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8898  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: E430025E21Rik

Human
homologs
Human Homolog KIAA0196, KIAA0196
NCBI Gene ID 9897
neXtProt AC  NX_Q12768
Human Synonyms  RTSC, SPG8
Human Chr (Location)  8q24.13; chr8:125024260-125091819 (-)  GRCh38
Disease Associations  (2) Diseases Associated with Human KIAA0196
Mutations,
alleles, and
phenotypes
All mutations/alleles(8) : Gene trapped(4) Radiation induced(1) Targeted(3)
Genomic Mutations involving E430025E21Rik (1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
E430025E21Rik interacts with 83 markers (Mir1a-1, Mir1a-2, Mir26a-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process endosomal transport
Component cytoplasm, endoplasmic reticulum, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (381)    Tissues (39)    Images (24)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 381
cDNA source data(205)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(205) cDNA(205)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000022350 (Evidence)
Entrez Gene223593 (Evidence)
UniGene218665
DFCITC1574295, TC1595990
NIA Mouse Gene IndexU036211
Consensus CDS ProjectCCDS37083.1
International Mouse Knockout Project StatusE430025E21Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 223593 NCBI Gene Model | MGI Sequence Detail 42156 C57BL/6J ±  kb
transcript NM_153548 RefSeq | MGI Sequence Detail 4038 C57BL/6 
polypeptide Q8C2E7 UniProt | EBI | MGI Sequence Detail 1159 Not Applicable 

For the selected sequences
All sequences(31) RefSeq(4) UniProt(3)
Polymorphisms
SNPs within 2kb(399 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR019393 WASH complex, subunit strumpellin
Graphical View of Protein Domain Structure
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(35)
Other
accession IDs
MGI:2146270

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory