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Gm12169
Gene Detail
Symbol

Name
ID
Gm12169
predicted gene 12169
MGI:3650838
Feature Type
protein coding gene
Genetic Map
Chromosome 11
27.98 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr11:46524212-46538156 bp, + strand
From VEGA annotation of GRCm38

  13945 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:130033  Vertebrate Homology Class
1 mouse; 1 rat

Gene Tree: Gm12169

Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Gm12169 interacts with 33 markers (Mir1a-1, Mir1a-2, Mir132, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
Expression
cDNA source data(4)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(4) cDNA(4)
Microarray probesets(1)
Other database
links
VEGA Gene ModelOTTMUSG00000005497 (Evidence)
Ensembl Gene ModelENSMUSG00000078924 (Evidence)
Entrez Gene210535 (Evidence)
UniGene173153
DFCITC1646784
DoTSDT.40180715
NIA Mouse Gene IndexU012505
Consensus CDS ProjectCCDS48777.1
International Mouse Knockout Project StatusGm12169
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000005497 VEGA Gene Model | MGI Sequence Detail 13945 C57BL/6J ±  kb
transcript OTTMUST00000012233 VEGA | MGI Sequence Detail 1065 Not Applicable 
polypeptide OTTMUSP00000005645 VEGA | MGI Sequence Detail 250 Not Applicable 

For the selected sequences
All sequences(17) RefSeq(2) UniProt(2)
Polymorphisms
SNPs within 2kb(170 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007110 Immunoglobulin-like domain
InterPro IPR013783 Immunoglobulin-like fold
InterPro IPR003599 Immunoglobulin subtype
InterPro IPR013106 Immunoglobulin V-set
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(21)
Other
accession IDs
MGI:2144661

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory