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Pex12
Gene Detail
Symbol

Name
ID
Pex12
peroxisomal biogenesis factor 12
MGI:2144177
Feature Type
protein coding gene
Genetic Map
Chromosome 11
50.30 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr11:83294642-83302586 bp, - strand
From VEGA annotation of GRCm38

  7945 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:240  Vertebrate Homology Class
1 human; 1 mouse; 2 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: peroxisome assembly protein 12
Gene Tree: Pex12

Human
homologs
Human Homolog PEX12, peroxisomal biogenesis factor 12
NCBI Gene ID 5193
neXtProt AC  NX_O00623
Human Synonyms  PAF-3, PBD3A
Human Chr (Location)  17q12; chr17:35574795-35578637 (-)  GRCh38
Disease Associations  (2) Diseases Associated with Human PEX12
Mutations,
alleles, and
phenotypes
All mutations/alleles(10) : Gene trapped(8) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Pex12 interacts with 183 markers (Mir1a-1, Mir1a-2, Mir9-1, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
Data Summary: Results (34)    Tissues (4)    Images (19)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 34
cDNA source data(9)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(9) cDNA(9)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000000912 (Evidence)
Ensembl Gene ModelENSMUSG00000018733 (Evidence)
Entrez Gene103737 (Evidence)
DFCITC1578428, TC1606958
NIA Mouse Gene IndexU033189
Consensus CDS ProjectCCDS25160.1
International Mouse Knockout Project StatusPex12
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000000912 VEGA Gene Model | MGI Sequence Detail 7945 C57BL/6J ±  kb
transcript OTTMUST00000001774 VEGA | MGI Sequence Detail 2729 Not Applicable 
polypeptide OTTMUSP00000000847 VEGA | MGI Sequence Detail 359 Not Applicable 

For the selected sequences
All sequences(60) RefSeq(10) UniProt(9)
Polymorphisms
SNPs within 2kb(55 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR017375 Peroxisome assembly protein 12
InterPro IPR006845 Pex, N-terminal
InterPro IPR013083 Zinc finger, RING/FYVE/PHD-type
InterPro IPR001841 Zinc finger, RING-type
Protein Ontology PR:000012558 peroxisome assembly protein 12
References
(Earliest) J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(36)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory