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Nkapd1 Gene Detail
Summary
  • Symbol
    Nkapd1
  • Name
    NKAP domain containing 1
  • Synonyms
    AU019823, LOC270156
  • Feature Type
    protein coding gene
  • IDs
    MGI:2143205
    NCBI Gene: 270156
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:50605240-50617464 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 27.75 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    81 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2143205
protein coding gene Chr9:50605240-50617464 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034783
protein coding gene Chr9:49504536-49518542 (-)
A/J MGP_AJ_G0034764
protein coding gene Chr9:47988886-48001645 (-)
AKR/J MGP_AKRJ_G0034692
protein coding gene Chr9:49000548-49015780 (-)
BALB/cJ MGP_BALBcJ_G0034756
protein coding gene Chr9:47716557-47732553 (-)
C3H/HeJ MGP_C3HHeJ_G0034466
protein coding gene Chr9:49487991-49500008 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035276
protein coding gene Chr9:50881192-50895963 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032189
protein coding gene Chr9:47457155-47470500 (-)
CAST/EiJ MGP_CASTEiJ_G0033788
protein coding gene Chr9:49436597-49452389 (-)
CBA/J MGP_CBAJ_G0034438
protein coding gene Chr9:52694436-52708059 (-)
DBA/2J MGP_DBA2J_G0034597
protein coding gene Chr9:47853156-47865465 (-)
FVB/NJ MGP_FVBNJ_G0034538
protein coding gene Chr9:47070126-47082201 (-)
LP/J MGP_LPJ_G0034678
protein coding gene Chr9:49864731-49877796 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034581
protein coding gene Chr9:54290737-54302749 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035297
protein coding gene Chr9:48978574-48990704 (-)
PWK/PhJ MGP_PWKPhJ_G0033493
protein coding gene Chr9:47829987-47842220 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033328
protein coding gene Chr9:49289792-49301777 (-)
WSB/EiJ MGP_WSBEiJ_G0033901
protein coding gene Chr9:48985206-48999896 (-)



Homology
more
  • Human Ortholog
    NKAPD1, NKAP domain containing 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    NKAPD1, NKAP domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C11orf57
  • Links
    NCBI Gene ID: 55216
    neXtProt AC: NX_Q6ZUT1
    UniProt: Q6ZUT1

  • Chr Location
    11q23.1; chr11:112074244-112085150 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 270156 NCBI Gene Model | MGI Sequence Detail 12225 C57BL/6J ±  kb
transcript NM_001360340 RefSeq | MGI Sequence Detail 3905 C57BL/6  
polypeptide NP_001128374 RefSeq | MGI Sequence Detail 292 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 4
Other
Accession IDs
less
MGI:2685485
References
more
  • Summaries
    All 22
    Phenotypes 6
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory