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Slc35d1
Gene Detail
Symbol

Name
ID
Slc35d1
solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
MGI:2140361
Synonyms
UGTREL7
Feature Type
protein coding gene
Genetic Map
Chromosome 4
47.43 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr4:103170649-103215164 bp, - strand
From VEGA annotation of GRCm38

  44516 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:22870  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: SLC35D1
Gene Tree: Slc35d1

Human
homologs
SLC35D1, solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 23169
neXtProt AC: NX_Q9NTN3

Human Synonyms: UGTREL7

Human Chr (Location): 1p31.3; chr1:66999332-67054397 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human SLC35D1

Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Gene trapped(1) Targeted(3)
Genomic Mutations involving Slc35d1 (1)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a null allele exhibit neonatal lethality and chondrodystrophy associated with impaired chondroitin sulfate biosynthesis.
 
Human Diseases Modeled in Mice Using Slc35d1 (1)    Mutations Annotated to Human Diseases (1)   
Interactions
Slc35d1 interacts with 291 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (2 records)
Data Summary: Results (1)    Tissues (1)    Images (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 1
cDNA source data(47)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: GEISHA SLC35D1 ; Xenbase slc35d1 ; ZFIN slc35d1a, slc35d1b    NEW 
Molecular
reagents
All nucleic(50) Genomic(1) cDNA(48) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000008067 (Evidence)
Ensembl Gene Model ENSMUSG00000028521 (Evidence)
Entrez Gene 242585 (Evidence)
UniGene 281800
DFCI TC1583567, TC1599558, TC1606398, TC1626520, TC1658270
DoTS DT.532037, DT.91361526, DT.91564158, DT.94126999, DT.94127003, DT.94127005, DT.97358451
NIA Mouse Gene Index U025311
Consensus CDS Project CCDS18409.1
International Mouse Phenotyping Consortium Status Slc35d1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000008067 VEGA Gene Model | MGI Sequence Detail 44516 C57BL/6J ±  kb
transcript OTTMUST00000018297 VEGA | MGI Sequence Detail 4021 Not Applicable 
polypeptide OTTMUSP00000008412 VEGA | MGI Sequence Detail 334 Not Applicable 

For the selected sequences
All sequences(63) RefSeq(8) UniProt(9)
Polymorphisms
SNPs within 2kb(371 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR004853 Domain of unknown function DUF250
References
(Earliest) J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(27)
Disease annotation references (1)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory