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Slc35d1
Gene Detail
 Symbol
Name
ID
Slc35d1
solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
MGI:2140361
Synonyms UGTREL7
Feature Type protein coding gene
Genetic Map
Chromosome 4
47.43 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr4:103170649-103215164 bp, - strand
From VEGA annotation of GRCm38

  44516 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:22870  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Slc35d1

Human
homologs
Human Homolog SLC35D1, solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1
NCBI Gene ID 23169
neXtProt AC  NX_Q9NTN3
Human Synonyms  UGTREL7
Human Chr (Location)  1p32-p31; chr1:66999332-67054397 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human SLC35D1
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(1) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a null allele exhibit neonatal lethality and chondrodystrophy associated with impaired chondroitin sulfate biosynthesis.
 
Human Diseases Modeled Using Mouse Slc35d1 (1)    Alleles Annotated to Human Diseases(1)   
Interactions
Slc35d1 interacts with 291 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process chondroitin sulfate biosynthetic process, embryonic skeletal system development, ...
Component endoplasmic reticulum, integral component of membrane, ...
Function pyrimidine nucleotide-sugar transmembrane transporter activity
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (1)    Tissues (1)    Images (1)
Theiler Stages: 23
Assay TypeResults
RNA in situ 1
cDNA source data(46)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(49) Genomic(1) cDNA(47) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000008067 (Evidence)
Ensembl Gene ModelENSMUSG00000028521 (Evidence)
Entrez Gene242585 (Evidence)
UniGene281800
DFCITC1583567, TC1599558, TC1606398, TC1626520, TC1658270
DoTSDT.532037, DT.91361526, DT.91564158, DT.94126999, DT.94127003, DT.94127005, DT.97358451
NIA Mouse Gene IndexU025311
Consensus CDS ProjectCCDS18409.1
International Mouse Knockout Project StatusSlc35d1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000008067 VEGA Gene Model | MGI Sequence Detail 44516 C57BL/6J ±  kb
transcript OTTMUST00000018297 VEGA | MGI Sequence Detail 4021 Not Applicable 
polypeptide OTTMUSP00000008412 VEGA | MGI Sequence Detail 334 Not Applicable 

For the selected sequences
All sequences(60) RefSeq(7) UniProt(9)
Polymorphisms SNPs within 2kb(371 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR004853 Domain of unknown function DUF250
References (Earliest) J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(27)
Disease annotation references (1)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory