About   Help   FAQ
Abo
Gene Detail
Symbol

Name
ID
Abo
ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase, transferase B, alpha 1-3-galactosyltransferase)
MGI:2135738
Synonyms
cis-AB transferase
Feature Type
protein coding gene
Genetic Map
Chromosome 2
19.06 cM, cytoband A3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr2:26842503-26864979 bp, - strand
From VEGA annotation of GRCm38

  22477 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:69306  Vertebrate Homology Class
1 human; 1 mouse; 3 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

HCOP human homology predictions: ABO
Gene Tree: Abo

Human
homologs
ABO, ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 28
neXtProt AC: NX_P16442

Human Synonyms: A3GALNT, A3GALT1, GTB, NAGAT

Human Chr (Location): 9q34.2; chr9:133255176-133275214 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Targeted(4)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Abo interacts with 81 markers (Mir24-1, Mir24-2, Mir27b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (2 records)
Data Summary: Results (94)    Tissues (94)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(7)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase abo    NEW 
Molecular
reagents
All nucleic(8) Genomic(1) cDNA(7)
Microarray probesets(5)
Other database
links
VEGA Gene Model OTTMUSG00000011583 (Evidence)
Ensembl Gene Model ENSMUSG00000015787 (Evidence)
Entrez Gene 80908 (Evidence)
UniGene 160386
DFCI TC1680791, TC1587488
DoTS DT.110698667, DT.55109073, DT.94284076
EC 2.4.1.40, 2.4.1.37
Consensus CDS Project CCDS15811.1
International Mouse Phenotyping Consortium Status Abo
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000011583 VEGA Gene Model | MGI Sequence Detail 22477 C57BL/6J ±  kb
transcript OTTMUST00000027073 VEGA | MGI Sequence Detail 1811 Not Applicable 
polypeptide OTTMUSP00000012337 VEGA | MGI Sequence Detail 334 Not Applicable 

For the selected sequences
All sequences(43) RefSeq(16) UniProt(2)
Polymorphisms
SNPs within 2kb(100 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR005076 Glycosyl transferase, family 6
Protein Ontology PR:000003587 histo-blood group ABO system transferase
References
(Earliest) J:68988 Yamamoto M, et al., Murine equivalent of the human histo-blood group ABO gene is a cis-AB gene and encodes a glycosyltransferase with both A and B transferase activity. J Biol Chem. 2001 Apr 27;276(17):13701-8
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(34)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/21/2015
MGI 5.22
The Jackson Laboratory