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Pcdhga8 Gene Detail
Summary
  • Symbol
    Pcdhga8
  • Name
    protocadherin gamma subfamily A, 8
  • Feature Type
    protein coding gene
  • IDs
    MGI:1935221
    NCBI Gene: 93716
  • Member of
    Pcdhg cluster
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:37725706-37841873 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 19.59 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1501 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1935221
protein coding gene Chr18:37725706-37841873 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024343
protein coding gene Chr18:36129702-36259977 (+)
A/J MGP_AJ_G0024311
protein coding gene Chr18:34893842-35011794 (+)
AKR/J MGP_AKRJ_G0024279
protein coding gene Chr18:35850883-35972570 (+)
BALB/cJ MGP_BALBcJ_G0024310
protein coding gene Chr18:34960023-35077409 (+)
C3H/HeJ MGP_C3HHeJ_G0024076
protein coding gene Chr18:35914089-36038769 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024752
protein coding gene Chr18:37428366-37559702 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022191
protein coding gene Chr18:34908775-35028291 (+)
CAST/EiJ MGP_CASTEiJ_G0023552
protein coding gene Chr18:35852676-35977834 (+)
CBA/J MGP_CBAJ_G0024046
protein coding gene Chr18:38537691-38667943 (+)
DBA/2J MGP_DBA2J_G0024176
protein coding gene Chr18:34495035-34611340 (+)
FVB/NJ MGP_FVBNJ_G0024142
protein coding gene Chr18:34203571-34321591 (+)
LP/J MGP_LPJ_G0024260
protein coding gene Chr18:36203105-36321813 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024173
protein coding gene Chr18:39805710-39929365 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024801
protein coding gene Chr18:35706010-35837204 (+)
PWK/PhJ MGP_PWKPhJ_G0023296
protein coding gene Chr18:34698149-34819114 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023101
protein coding gene Chr18:35933625-36054330 (+)
WSB/EiJ MGP_WSBEiJ_G0023614
protein coding gene Chr18:35607754-35737854 (+)



Homology
more
  • Human Ortholog
    PCDHGA8, protocadherin gamma subfamily A, 8
  • Vertebrate Orthologs
    9
  • Human Ortholog
    PCDHGA8, protocadherin gamma subfamily A, 8
    Orthology source: HomoloGene
  • Synonyms
    PCDH-GAMMA-A8
  • Links
    NCBI Gene ID: 9708
    neXtProt AC: NX_Q9Y5G5
    UniProt: Q9Y5G5

  • Chr Location
    5q31.3; chr5:141391916-141512979 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 93716 NCBI Gene Model | MGI Sequence Detail 116168 C57BL/6J ±  kb
transcript NM_033591 RefSeq | MGI Sequence Detail 4730 C57BL/6  
polypeptide NP_291069 RefSeq | MGI Sequence Detail 932 C57BL/6  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    Genomic 2
    cDNA 4
References
more
  • Summaries
    All 14
    Developmental Gene Expression 2
    Gene Ontology 1
  • Earliest
    J:67989 Wu Q, et al., Comparative dna sequence analysis of mouse and human protocadherin gene clusters. Genome Res. 2001 Mar;11(3):389-404
  • Latest
    J:195283 Ledderose J, et al., Maturation of postnatally generated olfactory bulb granule cells depends on functional gamma-protocadherin expression. Sci Rep. 2013;3:1514

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory