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Pcdhgb7 Gene Detail
Summary
  • Symbol
    Pcdhgb7
  • Name
    protocadherin gamma subfamily B, 7
  • Feature Type
    protein coding gene
  • IDs
    MGI:1935199
    NCBI Gene: 93704
  • Member of
    Pcdhg cluster
  • Gene Overview
    MyGene.info: PCDHGB7
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:37751779-37841870 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 19.62 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    975 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1935199
protein coding gene Chr18:37751600-37841873 (.)
129S1/SvImJ MGP_129S1SvImJ_G0024348
protein coding gene Chr18:36158529-36259977 (+)
A/J no annotation
AKR/J MGP_AKRJ_G0024284
protein coding gene Chr18:35876830-35972570 (+)
BALB/cJ MGP_BALBcJ_G0024315
protein coding gene Chr18:34985644-35077409 (+)
C3H/HeJ MGP_C3HHeJ_G0024081
protein coding gene Chr18:35947006-36038769 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024757
protein coding gene Chr18:37456946-37559702 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022196
protein coding gene Chr18:34936548-35028291 (+)
CAST/EiJ MGP_CASTEiJ_G0023556
protein coding gene Chr18:35880219-35977834 (+)
CBA/J MGP_CBAJ_G0024051
protein coding gene Chr18:38568913-38667943 (+)
DBA/2J MGP_DBA2J_G0024181
protein coding gene Chr18:34521003-34611340 (+)
FVB/NJ MGP_FVBNJ_G0024147
protein coding gene Chr18:34229666-34321591 (+)
LP/J MGP_LPJ_G0024265
protein coding gene Chr18:36229478-36321813 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024178
protein coding gene Chr18:39832978-39929365 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024806
protein coding gene Chr18:35731919-35837204 (+)
PWK/PhJ MGP_PWKPhJ_G0023300
protein coding gene Chr18:34724519-34819114 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023105
protein coding gene Chr18:35960506-36054330 (+)
WSB/EiJ MGP_WSBEiJ_G0023619
protein coding gene Chr18:35636823-35737854 (+)



Homology
more
  • Human Ortholog
    PCDHGB7, protocadherin gamma subfamily B, 7
  • Vertebrate Orthologs
    6
  • Human Ortholog
    PCDHGB7, protocadherin gamma subfamily B, 7
    Orthology source: HomoloGene
  • Synonyms
    ME6, PCDH-GAMMA-B7
  • Links
    NCBI Gene ID: 56099
    neXtProt AC: NX_Q9Y5F8
    UniProt: Q9Y5F8

  • Chr Location
    5q31.3; chr5:141417647-141512981 (+)  GRCh38.p7

Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 93704 NCBI Gene Model | MGI Sequence Detail 90092 C57BL/6J ±  kb
transcript NM_033579 RefSeq | MGI Sequence Detail 4531 Not Specified  
polypeptide NP_291057 RefSeq | MGI Sequence Detail 929 Not Specified  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    Genomic 2
    cDNA 3
References
more
  • Summaries
    All 15
    Developmental Gene Expression 3
    Gene Ontology 1
  • Earliest
    J:67989 Wu Q, et al., Comparative dna sequence analysis of mouse and human protocadherin gene clusters. Genome Res. 2001 Mar;11(3):389-404
  • Latest
    J:259654 Toyoda S, et al., Developmental epigenetic modification regulates stochastic expression of clustered protocadherin genes, generating single neuron diversity. Neuron. 2014 Apr 2;82(1):94-108

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory