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Pcdhgb4 Gene Detail
Summary
  • Symbol
    Pcdhgb4
  • Name
    protocadherin gamma subfamily B, 4
  • Feature Type
    protein coding gene
  • IDs
    MGI:1935173
    NCBI Gene: 93701
  • Member of
    Pcdhg cluster
Location & Maps
more
  • Sequence Map
    Chr18:37720369-37841870 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      121502 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 19.58 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    PCDHGB4, protocadherin gamma subfamily B, 4
  • Vertebrate Orthologs
    6
  • Human Ortholog
    PCDHGB4, protocadherin gamma subfamily B, 4
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CDH20, FIB2, PCDH-GAMMA-B4
  • Links
    NCBI Gene ID: 8641
    neXtProt AC: NX_Q9UN71

  • Chr Location
    5q31; chr5:141387885-141512979 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000050814 VEGA Gene Model | MGI Sequence Detail 121502 C57BL/6J ±  kb
transcript OTTMUST00000128766 VEGA | MGI Sequence Detail 4665 Not Applicable  
polypeptide OTTMUSP00000069247 VEGA | MGI Sequence Detail 912 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    1548 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    Genomic 2
    cDNA 4
References
more
  • Summaries
    All 15
    Developmental Gene Expression 3
    Gene Ontology 1
  • Earliest
    J:67989 Wu Q, et al., Comparative dna sequence analysis of mouse and human protocadherin gene clusters. Genome Res. 2001 Mar;11(3):389-404
  • Latest
    J:195283 Ledderose J, et al., Maturation of postnatally generated olfactory bulb granule cells depends on functional gamma-protocadherin expression. Sci Rep. 2013;3:1514

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/20/2016
MGI 6.05
The Jackson Laboratory