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Arl4d
Gene Detail
 Symbol
Name
ID
Arl4d
ADP-ribosylation factor-like 4D
MGI:1933155
Synonyms 1110036H21Rik, Arf4l, Arfl4, Arl5
Feature Type protein coding gene
Genetic Map
Chromosome 11
65.48 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr11:101665541-101667832 bp, + strand
From VEGA annotation of GRCm38

  2292 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:1255  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 zebrafish

Protein SuperFamily: ADP-ribosylation factor
Gene Tree: Arl4d

Human
homologs
Human Homolog ARL4D, ADP-ribosylation factor-like 4D
NCBI Gene ID 379
neXtProt AC  NX_P49703
Human Synonyms  ARF4L, ARL6
Human Chr (Location)  17q21.31; chr17:43398985-43401136 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Gene trapped(1) Targeted(1)
Interactions
Arl4d interacts with 82 markers (Mir15b, Mir27a, Mir27b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process small GTPase mediated signal transduction
Component cytoplasm, intracellular, ...
Function GTP binding, nucleotide binding
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (25)    Tissues (14)    Images (11)
Theiler Stages: 10, 18, 23, 25, 28
Assay TypeResults
RNA in situ 13
Northern blot 12
cDNA source data(27)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(27) cDNA(27)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000014383 (Evidence)
Ensembl Gene ModelENSMUSG00000034936 (Evidence)
Entrez Gene80981 (Evidence)
UniGene266840
DFCITC1583199
DoTSDT.489809, DT.91322363, DT.94233610
NIA Mouse Gene IndexU013376
Consensus CDS ProjectCCDS36336.1
International Mouse Knockout Project StatusArl4d
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000014383 VEGA Gene Model | MGI Sequence Detail 2292 C57BL/6J ±  kb
transcript OTTMUST00000034028 VEGA | MGI Sequence Detail 1382 Not Applicable 
polypeptide OTTMUSP00000015245 VEGA | MGI Sequence Detail 201 Not Applicable 

For the selected sequences
All sequences(23) RefSeq(2) UniProt(1)
Polymorphisms SNPs within 2kb(49 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
InterPro IPR006689 Small GTPase superfamily, ARF/SAR type
InterPro IPR024156 Small GTPase superfamily, ARF type
InterPro IPR005225 Small GTP-binding protein domain
Protein Ontology PR:000004287 ADP-ribosylation factor-like protein 4D
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(37)
Other
accession IDs
MGI:1913432, MGI:2144528

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory