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Arl4d Gene Detail
Summary
  • Symbol
    Arl4d
  • Name
    ADP-ribosylation factor-like 4D
  • Synonyms
    1110036H21Rik, Arf4l, Arfl4, Arl5
  • Feature Type
    protein coding gene
  • IDs
    MGI:1933155
    NCBI Gene: 80981
  • Gene Overview
    MyGene.info: ARL4D
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:101665541-101667832 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 65.48 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    48 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1933155
protein coding gene Chr11:101665541-101667832 (.)
129S1/SvImJ MGP_129S1SvImJ_G0019210
protein coding gene Chr11:104575035-104577328 (+)
A/J MGP_AJ_G0019178
protein coding gene Chr11:100170320-100172614 (+)
AKR/J MGP_AKRJ_G0019147
protein coding gene Chr11:103281076-103285051 (+)
BALB/cJ MGP_BALBcJ_G0019152
protein coding gene Chr11:100650818-100653109 (+)
C3H/HeJ MGP_C3HHeJ_G0018961
protein coding gene Chr11:103467430-103470443 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019601
protein coding gene Chr11:107837412-107839703 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017227
protein coding gene Chr11:97596454-97598738 (+)
CAST/EiJ MGP_CASTEiJ_G0018515
protein coding gene Chr11:104425367-104432689 (+)
CBA/J MGP_CBAJ_G0018930
protein coding gene Chr11:112269132-112271423 (+)
DBA/2J MGP_DBA2J_G0019042
protein coding gene Chr11:99686201-99688593 (+)
FVB/NJ MGP_FVBNJ_G0019032
protein coding gene Chr11:99219586-99221877 (+)
LP/J MGP_LPJ_G0019111
protein coding gene Chr11:105099459-105101751 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019063
protein coding gene Chr11:111839832-111842118 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019639
protein coding gene Chr11:103615345-103617638 (+)
PWK/PhJ MGP_PWKPhJ_G0018278
protein coding gene Chr11:100741888-100744209 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018070
protein coding gene Chr11:103339968-103342170 (+)
WSB/EiJ MGP_WSBEiJ_G0018564
protein coding gene Chr11:103607696-103609985 (+)



Homology
more
  • Human Ortholog
    ARL4D, ADP ribosylation factor like GTPase 4D
  • Vertebrate Orthologs
    8
  • Human Ortholog
    ARL4D, ADP ribosylation factor like GTPase 4D
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ARF4L, ARL6
  • Links
    NCBI Gene ID: 379
    neXtProt AC: NX_P49703
    UniProt: P49703

  • Chr Location
    17q21.31; chr17:43398985-43401136 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotypes from 1 allele in 1 genetic background
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 80981 NCBI Gene Model | MGI Sequence Detail 2292 C57BL/6J ±  kb
    transcript NM_025404 RefSeq | MGI Sequence Detail 1397 C57BL/6  
    polypeptide Q99PE9 UniProt | EBI | MGI Sequence Detail 201 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 29
      cDNA 29

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:1913432, MGI:2144528
    References
    more
    • Summaries
      All 38
      Developmental Gene Expression 2
      Gene Ontology 5
      Phenotypes 10
    • Earliest
      J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
    • Latest
      J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    last database update
    11/06/2018
    MGI 6.13
    The Jackson Laboratory