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Slc35b4
Gene Detail
Symbol

Name
ID
Slc35b4
solute carrier family 35, member B4
MGI:1931249
Synonyms
4930474D06Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 6
14.75 cM, cytoband B1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr6:34153380-34177111 bp, - strand
From VEGA annotation of GRCm38

  23732 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:5799  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: SLC35B4
Protein SuperFamily: solute carrier family 35, member B type
Gene Tree: Slc35b4

Human
homologs
SLC35B4, solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 84912
neXtProt AC: NX_Q969S0

Human Synonyms: YEA, YEA4

Human Chr (Location): 7q33; chr7:134289332-134320314 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(8) : Gene trapped(4) Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Slc35b4 interacts with 394 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (3 records)
Data Summary: Results (175)    Tissues (104)    Images (33)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 175
cDNA source data(13)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase slc35b4    NEW 
Molecular
reagents
All nucleic(15) cDNA(15)
Microarray probesets(7)
Other database
links
VEGA Gene Model OTTMUSG00000014770 (Evidence)
Ensembl Gene Model ENSMUSG00000018999 (Evidence)
Entrez Gene 58246 (Evidence)
DFCI TC1574549, TC1595334, TC1620202, TC1659290
DoTS DT.101152185, DT.101158298, DT.101174050, DT.91579907
NIA Mouse Gene Index U027146
Consensus CDS Project CCDS19989.1
International Mouse Phenotyping Consortium Status Slc35b4
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000014770 VEGA Gene Model | MGI Sequence Detail 23732 C57BL/6J ±  kb
transcript OTTMUST00000035056 VEGA | MGI Sequence Detail 6253 Not Applicable 
polypeptide OTTMUSP00000015651 VEGA | MGI Sequence Detail 331 Not Applicable 

For the selected sequences
All sequences(49) RefSeq(4) UniProt(3)
Polymorphisms
SNPs within 2kb(189 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR013657 UAA transporter
Protein Ontology PR:000015095 UDP-xylose and UDP-N-acetylglucosamine transporter
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:175002 Yazbek SN, et al., Deep congenic analysis identifies many strong, context-dependent QTLs, one of which, Slc35b4, regulates obesity and glucose homeostasis. Genome Res. 2011 Jul;21(7):1065-73
All references(36)
Other
accession IDs
MGI:1923067, MGI:2141685

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory