About   Help   FAQ
Slc35b4
Gene Detail
 Symbol
Name
ID
Slc35b4
solute carrier family 35, member B4
MGI:1931249
Synonyms 4930474D06Rik
Feature Type protein coding gene
Genetic Map
Chromosome 6
14.75 cM, cytoband B1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr6:34153380-34177111 bp, - strand
From VEGA annotation of GRCm38

  23732 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:5799  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: solute carrier family 35, member B type
Gene Tree: Slc35b4

Human
homologs
Human Homolog SLC35B4, solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4
NCBI Gene ID 84912
neXtProt AC  NX_Q969S0
Human Synonyms  YEA, YEA4
Human Chr (Location)  7q33; chr7:134289337-134317075 (-)  GRCh38
Alleles
and
phenotypes
All alleles(8) : Gene trapped(4) Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (13 annotations)
Process carbohydrate transport, ion transmembrane transport, ...
Component Golgi apparatus, integral component of membrane, ...
Function UDP-N-acetylglucosamine transmembrane transporter activity, UDP-xylose transmembrane transporter activity
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (175)    Tissues (104)    Images (33)
Theiler Stages: 22, 23
Assay TypeResults
RNA in situ 175
cDNA source data(13)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(15) cDNA(15)
Microarray probesets(7)
Other database
links
VEGA Gene ModelOTTMUSG00000014770 (Evidence)
Ensembl Gene ModelENSMUSG00000018999 (Evidence)
Entrez Gene58246 (Evidence)
DFCITC1574549, TC1595334, TC1620202, TC1659290
DoTSDT.101152185, DT.101158298, DT.101174050, DT.91579907
NIA Mouse Gene IndexU027146
Consensus CDS ProjectCCDS19989.1
International Mouse Knockout Project StatusSlc35b4
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000014770 VEGA Gene Model | MGI Sequence Detail 23732 C57BL/6J ±  kb
transcript OTTMUST00000035056 VEGA | MGI Sequence Detail 6253 Not Applicable 
polypeptide OTTMUSP00000015651 VEGA | MGI Sequence Detail 331 Not Applicable 

For the selected sequences
All sequences(49) RefSeq(4) UniProt(3)
Polymorphisms SNPs within 2kb(189 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR013657 UAA transporter
Protein Ontology PR:000015095 UDP-xylose and UDP-N-acetylglucosamine transporter
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:175002 Yazbek SN, et al., Deep congenic analysis identifies many strong, context-dependent QTLs, one of which, Slc35b4, regulates obesity and glucose homeostasis. Genome Res. 2011 Jul;21(7):1065-73
All references(38)
Other
accession IDs
MGI:1923067, MGI:2141685

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/15/2014
MGI 5.18
The Jackson Laboratory