About   Help   FAQ
Osr2
Gene Detail
Symbol

Name
ID
Osr2
odd-skipped related 2
MGI:1930813
Synonyms
5430409I15Rik, Osr2A, Osr2B
Feature Type
protein coding gene
Genetic Map
Chromosome 15
14.46 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr15:35296112-35303305 bp, + strand
From NCBI annotation of GRCm38

  7194 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:14200  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Osr2

Human
homologs
Human Homolog OSR2, odd-skipped related transciption factor 2
NCBI Gene ID 116039
neXtProt AC  NX_Q8N2R0
Human Chr (Location)  8q22.2; chr8:98944403-98952110 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(9) : Gene trapped(1) Targeted(8)
 
Homozygous null mice display neonatal lethality, cleft of the secondary palate, and thickened tympanic rings.
 
Interactions
Osr2 interacts with 95 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (30 annotations)
Process bone morphogenesis, cell differentiation, ...
Component nucleus
Function metal ion binding, nucleic acid binding, ...
External Resources: FuncBase
Expression
Literature Summary: (35 records)
Data Summary: Results (191)    Tissues (170)    Images (21)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 177
RT-PCR 14
cDNA source data(27)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(33) cDNA(28) Primer pair(3) Other(2)
Microarray probesets(4)
Other database
links
Ensembl Gene ModelENSMUSG00000022330 (Evidence)
Entrez Gene107587 (Evidence)
UniGene46336
DFCITC1582683, TC1600565, TC1623199
DoTSDT.101265476, DT.490211, DT.94183873, DT.94183874
NIA Mouse Gene IndexU016157
PDB2EE8
Consensus CDS ProjectCCDS27422.1
International Mouse Knockout Project StatusOsr2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 107587 NCBI Gene Model | MGI Sequence Detail 7194 C57BL/6J ±  kb
transcript NM_054049 RefSeq | MGI Sequence Detail 1710 C57BL/6 
polypeptide Q91ZD1 UniProt | EBI | MGI Sequence Detail 312 Not Applicable 

For the selected sequences
All sequences(24) RefSeq(4) UniProt(1)
Polymorphisms
SNPs within 2kb(80 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007087 Zinc finger, C2H2
InterPro IPR015880 Zinc finger, C2H2-like
InterPro IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Protein Ontology PR:000012062 protein odd-skipped-related 2
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:209112 Shimizu H, et al., The AERO system: a 3D-like approach for recording gene expression patterns in the whole mouse embryo. PLoS One. 2013;8(10):e75754
All references(76)
Other
accession IDs
MGI:1918649

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
10/08/2014
MGI 5.20
The Jackson Laboratory