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Copz2 Gene Detail
Summary
  • Symbol
    Copz2
  • Name
    coatomer protein complex, subunit zeta 2
  • Synonyms
    1110012D12Rik, nonclathrin coat protein zeta2-COP, zeta2-COP
  • Feature Type
    protein coding gene
  • IDs
    MGI:1929008
    NCBI Gene: 56358
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:96849876-96861203 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 60.13 cM, cytoband D
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    186 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1929008
protein coding gene Chr11:96849870-96861203 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019014
protein coding gene Chr11:99204369-99215769 (+)
A/J MGP_AJ_G0018982
protein coding gene Chr11:95139894-95153131 (+)
AKR/J MGP_AKRJ_G0018952
protein coding gene Chr11:98092642-98104348 (+)
BALB/cJ MGP_BALBcJ_G0018955
protein coding gene Chr11:95640660-95652339 (+)
C3H/HeJ MGP_C3HHeJ_G0018769
protein coding gene Chr11:98214206-98227900 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019407
protein coding gene Chr11:102285256-102299351 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017038
protein coding gene Chr11:92619358-92631297 (+)
CAST/EiJ MGP_CASTEiJ_G0018322
protein coding gene Chr11:99056293-99069790 (+)
CBA/J MGP_CBAJ_G0018740
protein coding gene Chr11:106483594-106496141 (+)
DBA/2J MGP_DBA2J_G0018848
protein coding gene Chr11:94702912-94715026 (+)
FVB/NJ MGP_FVBNJ_G0018837
protein coding gene Chr11:94180630-94191940 (+)
LP/J MGP_LPJ_G0018918
protein coding gene Chr11:99727039-99738342 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018864
protein coding gene Chr11:106428981-106440834 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019447
protein coding gene Chr11:98389991-98401311 (+)
PWK/PhJ MGP_PWKPhJ_G0018094
protein coding gene Chr11:95672505-95684739 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017884
protein coding gene Chr11:98122955-98134885 (+)
WSB/EiJ MGP_WSBEiJ_G0018372
protein coding gene Chr11:98299638-98311889 (+)



Homology
more
  • Human Ortholog
    COPZ2, coatomer protein complex subunit zeta 2
  • Vertebrate Orthologs
    8
  • Human Ortholog
    COPZ2, coatomer protein complex subunit zeta 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    zeta2-COP
  • Links
    NCBI Gene ID: 51226
    neXtProt AC: NX_Q9P299
    UniProt: Q9P299

  • Chr Location
    17q21.32; chr17:48026167-48048091 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 56358 NCBI Gene Model | MGI Sequence Detail 11328 C57BL/6J ±  kb
transcript NM_019877 RefSeq | MGI Sequence Detail 937 Not Specified  
polypeptide Q9JHH9 UniProt | EBI | MGI Sequence Detail 205 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 3
Other
Accession IDs
less
MGI:1915758
References
more
  • Summaries
    All 36
    Gene Ontology 5
    Phenotypes 10
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory