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Atrip Gene Detail
Summary
  • Symbol
    Atrip
  • Name
    ATR interacting protein
  • Synonyms
    6620401K05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925349
    NCBI Gene: 235610
Location & Maps
more
  • Sequence Map
    Chr9:109059747-109074124 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      14378 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 59.63 cM, cytoband F2
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    ATRIP, ATR interacting protein
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ATRIP, ATR interacting protein
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 84126
    neXtProt AC: NX_Q8WXE1

  • Chr Location
    3p21.31; chr3:48446710-48465655 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 15601
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed
  • HCOP
    human homology predictions: ATRIP
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033648 VEGA Gene Model | MGI Sequence Detail 14378 C57BL/6J ±  kb
transcript OTTMUST00000084781 VEGA | MGI Sequence Detail 2572 Not Applicable  
polypeptide OTTMUSP00000045733 VEGA | MGI Sequence Detail 785 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    100 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000004500 ATR-interacting protein
Molecular
Reagents
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  • All nucleic 36
    cDNA 36

    Microarray probesets 1
References
more
  • Summaries
    All 24
    Gene Ontology 2
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:183045 Refolio E, et al., The Ddc2/ATRIP checkpoint protein monitors meiotic recombination intermediates. J Cell Sci. 2011 Jul 15;124(Pt 14):2488-500

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
09/20/2016
MGI 6.05
The Jackson Laboratory