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Adamtsl2
Gene Detail
Symbol

Name
ID
Adamtsl2
ADAMTS-like 2
MGI:1925044
Synonyms
A930008K15Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 2
19.22 cM, cytoband A3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr2:27079379-27108981 bp, + strand
From VEGA annotation of GRCm38

  29603 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8798  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Adamtsl2

Human
homologs
Human Homolog ADAMTSL2, ADAMTS-like 2
NCBI Gene ID 9719
neXtProt AC  NX_Q86TH1
Human Synonyms  GPHYSD1
Human Chr (Location)  9q34.2; chr9:133532164-133575519 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human ADAMTSL2
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Adamtsl2 interacts with 91 markers (Mir23a, Mir23b, Mir27a, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (3 records)
Data Summary: Results (169)    Tissues (55)    Images (24)    Tissue x Stage Matrix (view)
Assay TypeResults
Immunohistochemistry 16
RNA in situ 141
Northern blot 11
RT-PCR 1
cDNA source data(17)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(19) cDNA(17) Primer pair(2)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000011845 (Evidence)
Ensembl Gene ModelENSMUSG00000036040 (Evidence)
Entrez Gene77794 (Evidence)
UniGene330088
DFCITC1752336, TC1588404, TC1586668
DoTSDT.40148123, DT.40147919, DT.103560057
NIA Mouse Gene IndexU001530
Consensus CDS ProjectCCDS15824.1
International Mouse Knockout Project StatusAdamtsl2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000011845 VEGA Gene Model | MGI Sequence Detail 29603 C57BL/6J ±  kb
transcript OTTMUST00000027839 VEGA | MGI Sequence Detail 3612 Not Applicable 
polypeptide OTTMUSP00000012646 VEGA | MGI Sequence Detail 957 Not Applicable 

For the selected sequences
All sequences(42) RefSeq(6) UniProt(7)
Polymorphisms
SNPs within 2kb(372 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR010294 ADAM-TS Spacer 1
InterPro IPR013273 Peptidase M12B, ADAM-TS
InterPro IPR010909 PLAC
InterPro IPR000884 Thrombospondin, type 1 repeat
Protein Ontology PR:000003739 ADAMTS-like protein 2
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(30)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory