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Arid2 Gene Detail
Summary
  • Symbol
    Arid2
  • Name
    AT rich interactive domain 2 (ARID, RFX-like)
  • Synonyms
    1700124K17Rik, 4432409D24Rik, zipzap/p200
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924294
    NCBI Gene: 77044
Location & Maps
more
  • Sequence Map
    Chr15:96287518-96404992 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      117475 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    ARID2, AT-rich interaction domain 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ARID2, AT-rich interaction domain 2
    Orthology source: HGNC, HomoloGene
  • Synonyms
    BAF200, p200
  • Links
    NCBI Gene ID: 196528
    neXtProt AC: NX_Q68CP9

  • Chr Location
    12q12; chr12:45729689-45908037 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 14601
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: ARID2
  • Gene Tree
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    28 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryogenesis
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
tumorigenesis
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    59
  • Chemically induced (other)
    1
  • Gene trapped
    54
  • Radiation induced
    2
  • Targeted
    2
  • Genomic Mutations
    3 involving Arid2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017290 VEGA Gene Model | MGI Sequence Detail 117475 C57BL/6J ±  kb
transcript OTTMUST00000041922 VEGA | MGI Sequence Detail 8507 Not Applicable  
polypeptide OTTMUSP00000018854 VEGA | MGI Sequence Detail 1828 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    298 from dbSNP Build 137
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 203
    cDNA 202
    Primer pair 1

    Microarray probesets 8
Other
Accession IDs
less
MGI:1920892
References
more
  • Summaries
    All 39
    Developmental Gene Expression 7
    Diseases 1
    Gene Ontology 3
    Phenotypes 28
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
  • Latest
    J:223458 He L, et al., BAF200 is required for heart morphogenesis and coronary artery development. PLoS One. 2014;9(10):e109493

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
02/02/2016
MGI 6.02
The Jackson Laboratory