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Cfap70 Gene Detail
Summary
  • Symbol
    Cfap70
  • Name
    cilia and flagella associated protein 70
  • Synonyms
    5330402L21Rik, Ttc18
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923920
    NCBI Gene: 76670
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:20394193-20452226 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 11.53 cM, cytoband B
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    359 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923920
protein coding gene Chr14:20394053-20452264 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021035
protein coding gene Chr14:13152636-13211499 (-)
A/J MGP_AJ_G0020984
protein coding gene Chr14:12845399-12906143 (-)
AKR/J MGP_AKRJ_G0020961
protein coding gene Chr14:13368913-13428258 (-)
BALB/cJ MGP_BALBcJ_G0020987
protein coding gene Chr14:12952978-13009771 (-)
C3H/HeJ MGP_C3HHeJ_G0020771
protein coding gene Chr14:13306607-13365339 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021420
protein coding gene Chr14:13644563-13704926 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018988
protein coding gene Chr14:13153450-13213865 (-)
CAST/EiJ MGP_CASTEiJ_G0020295
protein coding gene Chr14:13069748-13124680 (-)
CBA/J MGP_CBAJ_G0020737
protein coding gene Chr14:14335846-14395454 (-)
DBA/2J MGP_DBA2J_G0020860
protein coding gene Chr14:12675649-12731568 (-)
FVB/NJ MGP_FVBNJ_G0020843
protein coding gene Chr14:12570033-12625987 (-)
LP/J MGP_LPJ_G0020936
protein coding gene Chr14:13365025-13431658 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020869
protein coding gene Chr14:14112653-14176199 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021453
protein coding gene Chr14:13157966-13216770 (-)
PWK/PhJ MGP_PWKPhJ_G0020044
protein coding gene Chr14:12236495-12294008 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019866
protein coding gene Chr14:12935412-12996388 (-)
WSB/EiJ MGP_WSBEiJ_G0020351
protein coding gene Chr14:13140473-13196531 (-)



Homology
more
  • Human Ortholog
    CFAP70, cilia and flagella associated protein 70
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CFAP70, cilia and flagella associated protein 70
    Orthology source: HomoloGene, HGNC
  • Synonyms
    TTC18
  • Links
    NCBI Gene ID: 118491
    neXtProt AC: NX_Q5T0N1
    UniProt: Q5T0N1

  • Chr Location
    10q22.2; chr10:73253758-73361064 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 17048
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: CFAP70
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000039543 Ensembl Gene Model | MGI Sequence Detail 58034 C57BL/6J ±  kb
transcript ENSMUST00000056073 Ensembl | MGI Sequence Detail 3615 Not Applicable  
polypeptide ENSMUSP00000056869 Ensembl | MGI Sequence Detail 1141 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR011990 Tetratricopeptide-like helical domain superfamily
    IPR019734 Tetratricopeptide repeat
    IPR013026 Tetratricopeptide repeat-containing domain
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 4
References
more
  • Summaries
    All 25
    Developmental Gene Expression 1
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory