About   Help   FAQ
Trappc9 Gene Detail
Summary
  • Symbol
    Trappc9
  • Name
    trafficking protein particle complex 9
  • Synonyms
    1810044A24Rik, 2900005P22Rik, 4632408O18Rik, Nibp, TRS130
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923760
    NCBI Gene: 76510
Location & Maps
more
  • Sequence Map
    Chr15:72589621-73061204 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      471584 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    TRAPPC9, trafficking protein particle complex 9
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TRAPPC9, trafficking protein particle complex 9
    Orthology source: HGNC, HomoloGene
  • Synonyms
    IBP, IKBKBBP, MRT13, NIBP, T1, TRS120
  • Links
    NCBI Gene ID: 83696
    neXtProt AC: NX_Q96Q05

  • Chr Location
    8q24.3; chr8:139728081-140458579 (-)  GRCh38.p2

Human Diseases
more
  • Diseases
    1 with human TRAPPC9 associations

Human Disease Mouse Models
       Mental Retardation, Autosomal Recessive 13; MRT13   OMIM: 613192
Click on a disease name to see all genes associated with that disease.

  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    30 phenotype references
  • All Mutations and Alleles
    20
  • Chemically induced (other)
    3
  • Gene trapped
    12
  • Radiation induced
    2
  • Targeted
    3
  • Genomic Mutations
    5 involving Trappc9
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000047921 Ensembl Gene Model | MGI Sequence Detail 471584 C57BL/6J ±  kb
transcript ENSMUST00000089770 Ensembl | MGI Sequence Detail 4047 Not Applicable  
polypeptide ENSMUSP00000087202 Ensembl | MGI Sequence Detail 1139 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    2631 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000016619 trafficking protein particle complex subunit 9
  • InterPro Domains
    IPR013935 TRAPP II complex, Trs120
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 4
Other
Accession IDs
less
MGI:1920139, MGI:2443037
References
more
  • Summaries
    All 33
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 6
    Phenotypes 30
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:226605 Zhang Y, et al., Expression and function of NIK- and IKK2-binding protein (NIBP) in mouse enteric nervous system. Neurogastroenterol Motil. 2014 Jan;26(1):77-97

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
04/26/2016
MGI 6.03
The Jackson Laboratory