Trappc9
Gene Detail

Symbol Name ID

Trappc9 trafficking protein particle complex 9 MGI:1923760

Synonyms

1810044A24Rik, 2900005P22Rik, 4632408O18Rik, Nibp, TRS130

Feature Type

protein coding gene

Genetic Map

Chromosome 15

33.70 cM, cytoband E1
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr15:72589621-73061204 bp, - strand From Ensembl annotation of GRCm38   471584 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:81931  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Trappc9

Human homologs

Human Homolog		TRAPPC9, trafficking protein particle complex 9
NCBI Gene ID		83696
neXtProt AC		NX_Q96Q05
Human Synonyms		IBP, IKBKBBP, MRT13, NIBP, TRS120
Human Chr (Location)		8q24.3; chr8:140742586-141468678 (-)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human TRAPPC9

Alleles and phenotypes

All alleles(14) : Targeted(2) Gene trapped(12)

Gene Ontology (GO) classifications

All GO classifications: (4 annotations)

Process	cell differentiation
Component	cytoplasm, endoplasmic reticulum, ...

External Resources: FuncBase

Expression

Literature Summary: (1 records)
cDNA source data(13)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(14) cDNA(14)
Microarray probesets(4)

Other database links

Ensembl Gene Model	ENSMUSG00000047921 (Evidence)
Entrez Gene	76510 (Evidence)
DFCI	TC1575894, TC1591962, TC1595694, TC1596426, TC1601211, TC1746085
NIA Mouse Gene Index	U036267
Consensus CDS Project	CCDS37095.1, CCDS37096.1, CCDS49629.1, CCDS49630.1
International Mouse Knockout Project Status	Trappc9

Sequences

Length	Strain/Species
genomic	ENSMUSG00000047921	Ensembl Gene Model | MGI Sequence Detail	471584	C57BL/6J
transcript	ENSMUST00000089770	Ensembl | MGI Sequence Detail	4047	Not Applicable
polypeptide	ENSMUSP00000087202	Ensembl | MGI Sequence Detail	1139	Not Applicable

All sequences(56) RefSeq(10) UniProt(3)

Polymorphisms

SNPs(2224 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR013935	TRAPP II complex, Trs120
Protein Ontology	PR:000016619	trafficking protein particle complex subunit 9

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(31)

Other accession IDs

MGI:1920139, MGI:2443037