About   Help   FAQ
Slc30a9
Gene Detail
 Symbol
Name
ID
Slc30a9
solute carrier family 30 (zinc transporter), member 9
MGI:1923690
Synonyms 2310024J23Rik, GAC63
Feature Type protein coding gene
Genetic Map
Chromosome 5
36.02 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:67306955-67358565 bp, + strand
From VEGA annotation of GRCm38

  51611 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:4627  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Slc30a9

Human
homologs
Human Homolog SLC30A9, solute carrier family 30 (zinc transporter), member 9
NCBI Gene ID 10463
neXtProt AC  NX_Q6PML9
Human Synonyms  C4orf1, GAC63, HUEL, ZNT9
Human Chr (Location)  4p13; chr4:41990506-42087534 (+)  GRCh38
Alleles
and
phenotypes
All alleles(4) : Gene trapped(2) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (20 annotations)
Process cation transport, ion transport, ...
Component cytoplasm, cytoskeleton, ...
Function cation transmembrane transporter activity, chromatin binding, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (44)    Tissues (19)    Images (16)
Theiler Stages: 23
Assay TypeResults
RNA in situ 44
cDNA source data(21)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(22) cDNA(21) Primer pair(1)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000030420 (Evidence)
Ensembl Gene ModelENSMUSG00000029221 (Evidence)
Entrez Gene109108 (Evidence)
DFCITC1572698, TC1593685, TC1604630
DoTSDT.101389304, DT.101704114, DT.533130, DT.91326779
NIA Mouse Gene IndexU005655
Consensus CDS ProjectCCDS39103.1
International Mouse Knockout Project StatusSlc30a9
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000030420 VEGA Gene Model | MGI Sequence Detail 51611 C57BL/6J ±  kb
transcript OTTMUST00000075338 VEGA | MGI Sequence Detail 5833 Not Applicable 
polypeptide OTTMUSP00000039466 VEGA | MGI Sequence Detail 567 Not Applicable 

For the selected sequences
All sequences(64) RefSeq(4) UniProt(4)
Polymorphisms SNPs within 2kb(275 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002524 Cation efflux protein
InterPro IPR027469 Cation efflux protein transmembrane domain
InterPro IPR009061 DNA binding domain, putative
InterPro IPR022656 XPA C- terminal
Protein Ontology PR:000015082 zinc transporter 9
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(34)
Other
accession IDs
MGI:2141020

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/15/2014
MGI 5.18
The Jackson Laboratory