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Stpg3 Gene Detail
Summary
  • Symbol
    Stpg3
  • Name
    sperm tail PG rich repeat containing 3
  • Synonyms
    4933433C11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921722
    NCBI Gene: 74472
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:25212207-25214637 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 17.07 cM, cytoband A3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    11 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921722
protein coding gene Chr2:25212207-25218701 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025424
protein coding gene Chr2:23075501-23077931 (-)
A/J MGP_AJ_G0025401
protein coding gene Chr2:22177053-22179483 (-)
AKR/J MGP_AKRJ_G0025371
protein coding gene Chr2:22931594-22934024 (-)
BALB/cJ MGP_BALBcJ_G0025397
protein coding gene Chr2:22299793-22302223 (-)
C3H/HeJ MGP_C3HHeJ_G0025158
protein coding gene Chr2:22860759-22863189 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025841
protein coding gene Chr2:23809318-23811748 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023252
protein coding gene Chr2:21109399-21111856 (-)
CAST/EiJ MGP_CASTEiJ_G0024621
protein coding gene Chr2:22744431-22746874 (-)
CBA/J MGP_CBAJ_G0025136
protein coding gene Chr2:24645246-24647676 (-)
DBA/2J MGP_DBA2J_G0025269
protein coding gene Chr2:22033388-22035818 (-)
FVB/NJ MGP_FVBNJ_G0025231
protein coding gene Chr2:21772996-21775426 (-)
LP/J MGP_LPJ_G0025355
protein coding gene Chr2:23022386-23024816 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025262
protein coding gene Chr2:24850144-24852574 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025900
protein coding gene Chr2:22877837-22880267 (-)
PWK/PhJ MGP_PWKPhJ_G0024369
protein coding gene Chr2:21844531-21846975 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024169
protein coding gene Chr2:23033566-23036020 (-)
WSB/EiJ MGP_WSBEiJ_G0024690
protein coding gene Chr2:22950332-22952762 (-)



Homology
more
  • Human Ortholog
    STPG3, sperm-tail PG-rich repeat containing 3
  • Vertebrate Orthologs
    5
  • Human Ortholog
    STPG3, sperm-tail PG-rich repeat containing 3
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C9orf173
  • Links
    NCBI Gene ID: 441476
    neXtProt AC: NX_Q8N7X2
    UniProt: Q8N7X2

  • Chr Location
    9q34.3; chr9:137250840-137253483 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000036770 Ensembl Gene Model | MGI Sequence Detail 2431 C57BL/6J ±  kb
transcript ENSMUST00000043774 Ensembl | MGI Sequence Detail 1430 Not Applicable  
polypeptide ENSMUSP00000037603 Ensembl | MGI Sequence Detail 306 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR010736 Sperm-tail PG-rich repeat
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 1
References
more
  • Summaries
    All 19
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory